PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA08g08010
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 404aa    MW: 43050.6 Da    PI: 6.5949
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA08g08010genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.32.9e-22260322163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+elkre+rkq+NRe+ArrsR+RK+ae eeL+ +v++L+aeN++Lk+e+++l ++++klk ++
  CA08g08010 260 ERELKREKRKQSNRESARRSRLRKQAEAEELAVRVQSLTAENMTLKSEINKLIENSEKLKLDN 322
                 89**********************************************************887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.9E-31272IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.0E-31110241No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-16254319No hitNo description
SMARTSM003381.4E-18260324IPR004827Basic-leucine zipper domain
PfamPF001701.7E-20260322IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.53262325IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.31E-10263319No hitNo description
CDDcd147021.63E-19265313No hitNo description
PROSITE patternPS000360267282IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
DQSNLHVYPD WAAMQAYYGP RVAVPAYFNS AVAPGHTPHP YMWGPQPMIP PYGTPYAALY  60
AHGGVYAHPG VPIGSHPPSH GMATSPAVSQ AMDGASLSLD ASAKSSGNSE RGLMKKLKEF  120
EGLAMSLGNG SADNVEGGTD NGHSQSGETE GSTDGSNTNG VGVSERSKKR SCETTPDNSG  180
DDKSHSRRCQ PSGEVSNDAE KAIVAVSPGK VAEKVTGTVL SPSMTTLEMR NPASAHMKAG  240
PTNGSPLSPA LPNEAWLQNE RELKREKRKQ SNRESARRSR LRKQAEAEEL AVRVQSLTAE  300
NMTLKSEINK LIENSEKLKL DNAALMERLK NEQLGQTEEV SLGRIDDKRL QPVGTVNLLA  360
RVNNSGSSDR TNEEGEVYEN NSSGAKLHQL LDTNPRTDAV AAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276282RRSRLRK
2276283RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTrans-activator of a beta-glucuronidase (GUS) reporter gene. Binds to a G-box-related element, (5'-GCAACGTGGC-3'). Also binds to the HEX-motif of wheat histone H3 promoter.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0133410.0BT013341.1 Lycopersicon esculentum clone 135142F, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016538167.10.0PREDICTED: transcriptional activator TAF-1
SwissprotQ991421e-159TAF1_TOBAC; Transcriptional activator TAF-1 (Fragment)
TrEMBLA0A1U8DT230.0A0A1U8DT23_CAPAN; Common plant regulatory factor 1
TrEMBLA0A2G2YY320.0A0A2G2YY32_CAPAN; transcriptional activator TAF-1
STRINGPGSC0003DMT4000002660.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-109G-box binding factor 3
Publications ? help Back to Top
  1. Oeda K,Salinas J,Chua NH
    A tobacco bZip transcription activator (TAF-1) binds to a G-box-like motif conserved in plant genes.
    EMBO J., 1991. 10(7): p. 1793-802
    [PMID:2050116]