PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA08g05000
Common NameHSFA2
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 363aa    MW: 41187.2 Da    PI: 4.4948
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA08g05000genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.19.2e-36321232102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+ye++ed++++e+isws++ nsf+v+d+++f++++Lp++Fkhsnf+SF+RQLn+YgF+kv+ ++         weF+++ F  g+k+ll++ik
    CA08g05000  32 FLSKTYEMVEDSSTDEVISWSRERNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLKTIK 119
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
    CA08g05000 120 RRRN 123
                   *986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.107.9E-3828121IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.29E-3428121IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004155.6E-6028121IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004473.6E-3132121IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.8E-193255IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.8E-197082IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043407195IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.8E-198395IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009644Biological Processresponse to high light intensity
GO:0010200Biological Processresponse to chitin
GO:0010286Biological Processheat acclimation
GO:0034605Biological Processcellular response to heat
GO:0034620Biological Processcellular response to unfolded protein
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071456Biological Processcellular response to hypoxia
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MDDGVKVKVE EEGIATAVLP MEGLHDVGPP PFLSKTYEMV EDSSTDEVIS WSRERNSFIV  60
WDSHKFSTTL LPRFFKHSNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG QKHLLKTIKR  120
RRNVGQSMSQ QGSGPCIEVG YYGMEEELER LKRDKNVLMT EIVKLRQQQQ SARNQIIAMG  180
EKIESTEKKQ EQMINFLAKI FSNPTFLQQY LDKHVQRKDK QRIEVGQKRR LTMTPSIENL  240
QDVASVATAS DQPMNYSNQE REAELTNIGT DIEMLFSAAL ENESSSNVRS ASVVTASGTD  300
MEPVPENIWE ELLGDDHISG DGAEEVPIVD QPEFVVEVED LVSKTPVWGE ELEDLVDQLG  360
FL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B8e-233012127129Heat shock factor protein 1
5d5v_B8e-233012127129Heat shock factor protein 1
5d5v_D8e-233012127129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114120LKTIKRR
Functional Description ? help Back to Top
Source Description
UniProtDNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4029230.0JX402923.1 Capsicum annuum cultivar R9 heat stress transcription factor A2 (HSFA2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001311490.10.0heat shock factor protein HSF30
SwissprotP411520.0HSF30_SOLPE; Heat shock factor protein HSF30
TrEMBLA0A1U8DRZ10.0A0A1U8DRZ1_CAPAN; Heat shock factor protein HSF30
TrEMBLA0A2G2YWS30.0A0A2G2YWS3_CAPAN; heat shock factor protein HSF30 isoform X1
TrEMBLA0A2G3BRR50.0A0A2G3BRR5_CAPCH; Heat shock factor protein HSF30
STRINGXP_009799323.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57224113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-119heat shock transcription factor A2
Publications ? help Back to Top
  1. Guo M, et al.
    Cloning and expression analysis of heat-shock transcription factor gene CaHsfA2 from pepper (Capsicum annuum L.).
    Genet. Mol. Res., 2014. 13(1): p. 1865-75
    [PMID:24668674]
  2. Scharf KD,Rose S,Thierfelder J,Nover L
    Two cDNAs for tomato heat stress transcription factors.
    Plant Physiol., 1993. 102(4): p. 1355-6
    [PMID:8278556]