PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34787
Common NameKK1_034261
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 291aa    MW: 33008 Da    PI: 8.3158
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34787genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.4e-18148197355
            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    ++GVr+++ +g+++AeIrd + ng   r+++g+f+tae Aa a+++a+++ +g
  C.cajan_34787 148 FRGVRRRP-WGKFAAEIRDSTRNG--VRVWIGTFDTAEAAALAYDQAALSTRG 197
                    8*******.**********44465..**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.0E-34147211IPR001471AP2/ERF domain
PROSITE profilePS5103222.392147205IPR001471AP2/ERF domain
PRINTSPR003679.1E-10148159IPR001471AP2/ERF domain
PfamPF008472.7E-12148197IPR001471AP2/ERF domain
CDDcd000184.31E-18148206No hitNo description
Gene3DG3DSA:3.30.730.108.2E-29148206IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-21148206IPR016177DNA-binding domain
PRINTSPR003679.1E-10171187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MSIYKGGKSP SILFKAYHRH IRRREKTYLN LIGVCIKIHQ EMDFDYSSFF QYQNLNTNNS  60
FLNSCVSSSE PFPWEDFLLF DEENTTLNPF SNSQSQIKES SSDSNSSGSL VSTESQEVSS  120
NLSHHADQVL IKETTQPPKE SNKEKRPFRG VRRRPWGKFA AEIRDSTRNG VRVWIGTFDT  180
AEAAALAYDQ AALSTRGSMA VLNFPEEVVR ESLKDMNNKT SWEDGSSPVL ALKRKHTMRR  240
KSKTCNKKTK RDHGKGLENM VSQSVLVLED LGSEYLEQLL SLTSSDAELI C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-26136207374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34787
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0956251e-151BT095625.1 Soybean clone JCVI-FLGm-15E21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237863.10.0ethylene-responsive transcription factor 1B
TrEMBLA0A151RNY00.0A0A151RNY0_CAJCA; Ethylene-responsive transcription factor 1B
STRINGGLYMA13G18410.11e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF151851013
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-44ethylene response factor 1