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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_27330 | ||||||||
Common Name | KK1_030065 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | WRKY | ||||||||
Protein Properties | Length: 606aa MW: 65713.5 Da PI: 6.2025 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 78.6 | 7.1e-25 | 344 | 398 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv +r+aed +v+++tYeg+Hnh+ C.cajan_27330 344 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPV----QRCAEDRTVLITTYEGNHNHP 398 7***************************99**95....67999***************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.4E-27 | 328 | 400 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.19E-23 | 336 | 400 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 24.42 | 338 | 400 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.0E-29 | 343 | 399 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-20 | 345 | 398 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence Send to blast |
MVRGGGLSMD SDPIGSFFLH NKPIVLNSFP TEDTNHPKWK LSNNMDATKP SSSPFQVNLS 60 SSSNNHASNS PPSHNHMRTE MDFFSDKNIL KDDNVLASAS VPDNDHHRST TPPTLEFKVN 120 TGLNLLTTNT SSDQSMVDDE ISPNSEDKRT KNELAVLQAE LERMKRENQK LRDMLDQVNA 180 DYNALQIHFM DLMQQQKAEE VGEQEVFGGK LEEKKQGESG GVLVPRQFMD LGLATNADTD 240 EPSSSSGGRS QDRSGSSGNN NIEVASKELG TSKNDEGVVY EQEKKEYGRV NEREDSPSGH 300 AFAGDNKIPR LSPPKNNNNV DQAEATMRKA RVSVRARSEA PMITDGCQWR KYGQKMAKGN 360 PCPRAYYRCT MAAGCPVQRC AEDRTVLITT YEGNHNHPLP PAAMAMAQTT SSAARMLLSG 420 SMSSADSLMN ANFLTRTLLP CSSSMATISA SAPFPTVTLD LTQSPNPLQF PRHPNQLQIP 480 LQGLPQNFAS SSASLMPQIF GQALYNQSKF SGLQMSHDAD PSQFGGHSQQ VPPHLADTVG 540 AAIAADPNFT AALAAAITSI IGGAQQQHNS NNNNNNNNNN VNMTASNNNG NGNISSSSNN 600 NTNARQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 8e-19 | 330 | 402 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_27330 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020234210.1 | 0.0 | probable WRKY transcription factor 31 | ||||
Swissprot | Q9C519 | 1e-127 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | A0A151S0H3 | 0.0 | A0A151S0H3_CAJCA; WRKY transcription factor 6 | ||||
STRING | XP_007132527.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF866 | 34 | 121 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-106 | WRKY family protein |