PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22430
Common NameKK1_023091
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 500aa    MW: 56564.9 Da    PI: 8.3627
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22430genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1676.6e-52261531128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    l+pGfrFhPtdeelv +yLk+kv+gk++++ ++i+evdiy++eP dL   +++k++++ewyfFs  dkky +g r nrat +gyWkatg+d++v++
  C.cajan_22430  26 LAPGFRFHPTDEELVIYYLKRKVSGKPFRF-DAISEVDIYRSEPGDLAdkSRLKTRDQEWYFFSALDKKYGNGGRMNRATGKGYWKATGNDRQVKH 120
                    579**************************9.99**************75348899999************************************** PP

            NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++vglkktLvf++grap+g++t+Wvmheyrl
  C.cajan_22430 121 -EERVVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 153
                    .999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-5918182IPR003441NAC domain
PROSITE profilePS5100557.38826181IPR003441NAC domain
PfamPF023651.5E-2728153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MGRESVFLPT TASTTVNPVA APPTSLAPGF RFHPTDEELV IYYLKRKVSG KPFRFDAISE  60
VDIYRSEPGD LADKSRLKTR DQEWYFFSAL DKKYGNGGRM NRATGKGYWK ATGNDRQVKH  120
EERVVGLKKT LVFHSGRAPD GKRTNWVMHE YRLTEKEMER IGTGSSQPQK DAYVLCRVFH  180
KNNIGPPNGQ RYAPFIEEEW DDAAGMVPGV EPVDNGYVAH QPRVEGNGVL CTEVVQVSCL  240
HFFRCYYWIL PKFVITIVRT TVKLIRKVNY HSTSQHYVMT TKALDTQSMN KAPFDVNKLP  300
IETQNLLAVC KRESMAEYPS PEQDDNNCKH VDEDPSPQTD NPKPFSQIYK RRRHNLNSNH  360
SNVSGDAIQG SQDLCSSTIS TNASTLSTTT AAATTTNTVP KKHFLSALVE YSLLESLESK  420
ESLASIKTPD FDTQNLESSM PPNCAKFIKQ LQSEMQKLSV EKETMRFEMM SAQATINILQ  480
SRVDILSKEN EELKRLVQNP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A4e-472518319170NAC domain-containing protein 19
3swm_B4e-472518319170NAC domain-containing protein 19
3swm_C4e-472518319170NAC domain-containing protein 19
3swm_D4e-472518319170NAC domain-containing protein 19
3swp_A4e-472518319170NAC domain-containing protein 19
3swp_B4e-472518319170NAC domain-containing protein 19
3swp_C4e-472518319170NAC domain-containing protein 19
3swp_D4e-472518319170NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00612ChIP-seqTransfer from AT3G10490Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22430
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222543.10.0NAC domain containing protein 50 isoform X1
TrEMBLA0A151T0U50.0A0A151T0U5_CAJCA; NAC domain-containing protein 78
STRINGGLYMA20G33430.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF81893241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.11e-104NAC domain containing protein 52