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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_08473 | ||||||||
Common Name | KK1_008722 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | WRKY | ||||||||
Protein Properties | Length: 84aa MW: 9884.19 Da PI: 9.9509 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.4 | 4.5e-11 | 47 | 73 | 1 | 27 |
---SS-EEEEEEE--TT-SS-EEEEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrC 27 ldDgy+W+KYG+K vk+++fpr C C.cajan_08473 47 LDDGYQWKKYGKKIVKNNKFPRLVPHC 73 59********************76555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 9.7E-12 | 32 | 74 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.35E-10 | 39 | 75 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.564 | 42 | 84 | IPR003657 | WRKY domain |
SMART | SM00774 | 0.0043 | 47 | 79 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.1E-8 | 48 | 73 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence Send to blast |
MLPTSSTAFS SDFNVAYHSN VHEVSRTDQE IKQQRYAFQT RSPVDVLDDG YQWKKYGKKI 60 VKNNKFPRLV PHCHFYILKF NSSI |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_08473 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020211218.1 | 3e-44 | probable WRKY transcription factor 75 | ||||
Swissprot | Q9FYA2 | 4e-16 | WRK75_ARATH; Probable WRKY transcription factor 75 | ||||
TrEMBL | A0A151TR88 | 1e-56 | A0A151TR88_CAJCA; Putative WRKY transcription factor 75 | ||||
STRING | GLYMA06G17690.2 | 2e-17 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1156 | 34 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 8e-10 | WRKY DNA-binding protein 75 |