PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast01G195400.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 426aa    MW: 45501.3 Da    PI: 9.8995
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast01G195400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_164.61.8e-20291352263
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L+  + +l++ ++kl+se+
  Brast01G195400.1.p 291 KESKRERRKQSNRESARRSRLRKQAETEELAKKVELLTAENTSLRRDIRRLTESSKKLRSEN 352
                         899*********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.7E-2654146IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.0E-16285350No hitNo description
SMARTSM003383.1E-19290354IPR004827Basic-leucine zipper domain
PfamPF001702.1E-18291352IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.461292355IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-10294349No hitNo description
CDDcd147026.68E-21295343No hitNo description
PROSITE patternPS000360297312IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MHTTHTSKAK APSPRCIRSL ASLRTTAVHS EICCLNSPAG ISIASDPGIH KKSMGHDEAV  60
VIQNSGKAPS PPKDQPALYP CLDWSAMQAY YGPGIMPPTY FCPGLVPGHA PPPYMWSPQP  120
LLPSASAKPY TAVHPHGGGF SHPFMPLMVN PLSVEPAKSV NSDENILNKK LKEVDGTAVS  180
TGSGHSEKTS WDCSVGGSSD GNTQKASGTP KKRRLHGTPI ADGKKALHYS AAMQTGGTTT  240
ANDVPGEQGT PTTLPNLYIP DRAIKTNAST ASDFSVIGTP ISTEFPDQDG KESKRERRKQ  300
SNRESARRSR LRKQAETEEL AKKVELLTAE NTSLRRDIRR LTESSKKLRS ENSALMAKLT  360
DTAPDQTPEA FADQTAEPSA RAAKSFMPVM DSTSASRNSG HMPHAVPRLR QLLGSRLASD  420
AVAAR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306312RRSRLRK
2306313RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast01G195400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010232100.10.0G-box-binding factor 3 isoform X2
TrEMBLA0A0Q3MXI90.0A0A0Q3MXI9_BRADI; Uncharacterized protein
STRINGBRADI2G45567.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.18e-65G-box binding factor 3