 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
BGIOSGA035745-PA |
| Common Name | OsI_37092 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
| Family |
GRAS |
| Protein Properties |
Length: 593aa MW: 66589 Da PI: 6.6751 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA035745-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 286.5 | 7.2e-88 | 214 | 583 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+ lL++cA+a ++++++ a +lL++++++a +gd+mqR+a+yf+++L+arla+ +++ly+ ++ +++ +e l+++kl+ ++ + k++
BGIOSGA035745-PA 214 RLLLIQCAQATATDNQQSAGELLKKIKQHALATGDAMQRVAHYFAKGLEARLAGRGKHLYQ-----NQMRMSLVEYLKVYKLYMAACCFTKVA 301
568***************************************************9999994.....33446699******************* PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
+ a +I++av+g++r+Hi+D++ Gl+Wp Ll+ L sR++gpp++RiT v+ + +++ee g+ L++ A+e++vpf+f++++a +
BGIOSGA035745-PA 302 LMFAAMTIMQAVQGKKRLHIVDYGPRCGLHWPDLLRRLGSREDGPPEVRITIVDILLPAfrPFQRIEEAGHCLSSCANEFRVPFRFQAVAAAK 394
*****************************************************997777789**************************9999* PP
GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
+e++ e+L++kp+E+l+Vn l+ l+desv + +rd L+ + +++P+v++ + ++ ++sFl rf l yysalfd l+a+ p
BGIOSGA035745-PA 395 WETVGAEDLHIKPDEVLVVNDLLSFSALMDESVFCDGpnPRDVALRNISKMQPDVFIQGITNDSY-GASFLSRFRAVLLYYSALFDILDATTP 486
********************************98776669******************9999888.789************************ PP
GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
r+s r +E+ llg+ + n++acega+ +er e++++W++r ++aG+++++l+ +++++++ ++k++ + + + e+ ++l++gW++r L++
BGIOSGA035745-PA 487 RDSGLRLALEQNLLGPYALNAIACEGADLVERPEKYKQWQARNHRAGMQQLKLRPDIVDTIRDEVNKYHHKDFLLGEDGQWLLQGWMGRILFA 579
*********************************************************************888********************* PP
GRAS 370 vSaW 373
SaW
BGIOSGA035745-PA 580 HSAW 583
**** PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 593 aa
Download sequence Send
to blast |
MANPEDFFWE ALLKENEAPS PPPVFFDLPA TPLSNSDGTD PSSLDNQLLS YVSRMLMEDE 60
MGSSAAITNL QCVNRGSTEE ANNMLPGSEV VRAFSKGMGE ASKLLPRNNS FRTLEAVDQV 120
SSDGHCRGRK KKNHDRDEQQ LEEELGRSSK LAALTIAGTQ EAGARELLDE LMLHAHETCI 180
KDMEKLRIDM DNEAEKKINK KDKKGSSSKV VDLRLLLIQC AQATATDNQQ SAGELLKKIK 240
QHALATGDAM QRVAHYFAKG LEARLAGRGK HLYQNQMRMS LVEYLKVYKL YMAACCFTKV 300
ALMFAAMTIM QAVQGKKRLH IVDYGPRCGL HWPDLLRRLG SREDGPPEVR ITIVDILLPA 360
FRPFQRIEEA GHCLSSCANE FRVPFRFQAV AAAKWETVGA EDLHIKPDEV LVVNDLLSFS 420
ALMDESVFCD GPNPRDVALR NISKMQPDVF IQGITNDSYG ASFLSRFRAV LLYYSALFDI 480
LDATTPRDSG LRLALEQNLL GPYALNAIAC EGADLVERPE KYKQWQARNH RAGMQQLKLR 540
PDIVDTIRDE VNKYHHKDFL LGEDGQWLLQ GWMGRILFAH SAWVRQSQDT SSR
|
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Os.14762 | 0.0 | callus| flower| leaf| panicle| seed| stem |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012619 | 0.0 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |
