![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Araip.T09RD |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family |
LFY |
Protein Properties |
Length: 424aa MW: 47539.4 Da PI: 6.4218 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.T09RD | genome | NCGR_PGC | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Aip&pid=Araip.T09RD) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 636.5 | 4.2e-194 | 1 | 401 | 1 | 385 |
FLO_LFY 1 mdp.eafsaslfkwdpraaaaapp.......arlleeaavseap...leaaaaaaark.lreleelfkayGvryltvakiaelGftvstLvdmkdeel 86
mdp +af++slfkwdpr++ +pp ++l +++++ + ++++ +r l +leelf+ayG+ry+t+ak+aelGftv tL+dmkd+e+
Araip.T09RD 1 MDPaDAFTTSLFKWDPRTVLPPPPssatrppPQILDYTVAPP-AvspSSVSFPPPKRPdLGGLEELFQAYGIRYYTAAKMAELGFTVRTLIDMKDDEI 97
666256***********9996655333222222222222222.122222222222222366************************************* PP
FLO_LFY 87 ddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet.aldalsqeglseepvqeekeaagsggeglgeaelvaaeekksee 183
dd+m+sls+ifr+dllvGeryG+kaavraerrrleeee k+r+ l ++d++t aldalsqeglseepvq+ekeaagsgg++ ++e+v+ e+++++
Araip.T09RD 98 DDMMNSLSQIFRWDLLVGERYGVKAAVRAERRRLEEEELIKRRNFLCTTDTTTnALDALSQEGLSEEPVQQEKEAAGSGGGS--TWEVVGGGEERRKQ 193
**************************************8888888878877666************************9998..89999887643333 PP
FLO_LFY 184 ekkkaskk...kqkrkkkkelkse.......ededee.eeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkia 270
+++++++ k ++k + + e+e+ e ee+d e ++g +g erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+ia
Araip.T09RD 194 VQQERRRRrsnKINNKGS-----NrsnnedgEEEELEgEENDMIEGSNGGSGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIA 286
222222220002222222.....122232322222220222333344777888********************************************* PP
FLO_LFY 271 kerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiW 368
k+rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLde+asn+lrr+fkergenvGawrqacykplvaiaarqgwdida+fnahprLsiW
Araip.T09RD 287 KDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDASNELRRTFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIW 384
************************************************************************************************** PP
FLO_LFY 369 YvPtkLrqLChlerska 385
YvPtkLrqLCh+e ++a
Araip.T09RD 385 YVPTKLRQLCHAESNNA 401
*************9886 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 424 aa
Download sequence Send
to blast |
MDPADAFTTS LFKWDPRTVL PPPPSSATRP PPQILDYTVA PPAVSPSSVS FPPPKRPDLG 60 GLEELFQAYG IRYYTAAKMA ELGFTVRTLI DMKDDEIDDM MNSLSQIFRW DLLVGERYGV 120 KAAVRAERRR LEEEELIKRR NFLCTTDTTT NALDALSQEG LSEEPVQQEK EAAGSGGGST 180 WEVVGGGEER RKQVQQERRR RRSNKINNKG SNRSNNEDGE EEELEGEEND MIEGSNGGSG 240 GERQREHPFI VTEPGEVARG KKNGLDYLFH LYEQCREFLI QVQAIAKDRG EKCPTKVTNQ 300 VFRYAKKAGA SYINKPKMRH YVHCYALHCL DEDASNELRR TFKERGENVG AWRQACYKPL 360 VAIAARQGWD IDAIFNAHPR LSIWYVPTKL RQLCHAESNN AAVVVAATVA VSTSVSSAVA 420 QLPF
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Nucleic Localization
Signal ? help
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![NLS](draw_nls.php?sp=Aip&pid=Araip.T09RD) |
No. |
Start |
End |
Sequence |
1 | 189 | 201 | RRKQVQQERRRRR |
Functional Description ? help
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Source |
Description |
UniProt | May regulate indeterminacy during leaf and flower development. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-110 | floral meristem identity control protein LEAFY (LFY) |