PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K3GK4
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 390aa    MW: 43322.8 Da    PI: 7.2812
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K3GK4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-174089255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  Araip.K3GK4 40 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 89
                 59*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.3E-114089IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-294096IPR001471AP2/ERF domain
SMARTSM003805.8E-3340103IPR001471AP2/ERF domain
PROSITE profilePS5103222.1154097IPR001471AP2/ERF domain
CDDcd000185.89E-304096No hitNo description
SuperFamilySSF541713.6E-214098IPR016177DNA-binding domain
PRINTSPR003672.2E-94152IPR001471AP2/ERF domain
PRINTSPR003672.2E-96379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MDKALRRLNG MSPLPEPPSN KPTKRTMRDT STAPAAGAMR YRGVRRRPWG RYAAEIRDPQ  60
SKERRWLGTF DTAEEAACAY DCAARAMRGL KARTNFVYHT SPPHSSSITI TNNHNNLLNL  120
HNHLFTHNQF SFLNHHNQLF NGHNRHFGGC WSDPSSSSTF QQQRNLHSID MLLQDFIASS  180
SPDYLCDTKG SFVNSHPVNV ANNYSAPCSD TSHVGCGSGS KIDNTTTTTT NNNNNNNNNN  240
NKKADHGGGE EDSKEQLYEG SESSGLLEEI VNGFLKKKPK LNKCERSLGT STTATDGSCH  300
SSLLPPPLPL VVSGESKRND GFGVHLDQQG FHYMQQIGGG FNNDFSNMVM QPNMPLQEND  360
NQIMKMMMLN NDNNHAEVDC SIIDNIFQDA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-194196359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A5e-1940961471Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.K3GK4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020978361.10.0ethylene-responsive transcription factor ESR1-like
TrEMBLA0A445CYS01e-176A0A445CYS0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.15e-13DORNROSCHEN-like