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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Araip.EKK4C |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
MYB |
| Protein Properties |
Length: 287aa MW: 31788.9 Da PI: 8.0045 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Araip.EKK4C | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 58.1 | 2e-18 | 25 | 70 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+WT++Ed l+++v+q+G ++W+ I++ ++ gR++k+c++rw +
Araip.EKK4C 25 KGSWTPQEDATLLKLVAQHGARNWSVISNGIP-GRSGKSCRLRWCNQ 70
799*****************************.***********985 PP
|
| 2 | Myb_DNA-binding | 55.8 | 1.1e-17 | 79 | 121 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T+ Ede++++a++ +G++ W+tI+r ++ gRt++ +k++w++
Araip.EKK4C 79 PFTPAEDEIILKAHAVHGNK-WATISRLLP-GRTDNAIKNHWNST 121
89******************.*********.***********986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MALFESVAMM IEDNNKFDEE ADRIKGSWTP QEDATLLKLV AQHGARNWSV ISNGIPGRSG 60
KSCRLRWCNQ LSPDVQHRPF TPAEDEIILK AHAVHGNKWA TISRLLPGRT DNAIKNHWNS 120
TLRRRKGVTV AFPGAGFPSA AATDASASGG LSGFSSAATS SSSDFSPTFV CQKRKGEQLE 180
LPQNVNKKPC LAAVAVNSHA EEEVRQKRNA EEEEEGGVTT LSLLPPGEKP LGAEGVWRKE 240
EEVNRYGEHA WLMKMMRPMI AEEVRRYIQS LQKTQPLFEP DPPSKNF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gv2_A | 8e-37 | 24 | 125 | 3 | 104 | MYB PROTO-ONCOGENE PROTEIN |
| 1mse_C | 8e-37 | 24 | 125 | 3 | 104 | C-Myb DNA-Binding Domain |
| 1msf_C | 8e-37 | 24 | 125 | 3 | 104 | C-Myb DNA-Binding Domain |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
