PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.E14YP
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 268aa    MW: 30616.4 Da    PI: 10.5827
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.E14YPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.42.6e-1828018100
                  --HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
           B3  18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                  +pk f +++ +   +  ++  l d +g+sW+v+l  +k  ++  vl++GWkeF++++ L++ Df+vF++dg+s+f  +vk+f+ks
  Araip.E14YP   2 IPKAFSAKFiNA--NIVRKTALVDHEGNSWDVEL--KKMEDGlLVLKNGWKEFARDKCLEQADFLVFEYDGNSKF--HVKIFSKS 80 
                  899998787533..344578999***********..7777778****************************9999..*****985 PP
2B344.62.5e-14178266997
                  HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-..SS.SEE..EEEEE CS
           B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld..gr.sefelvvkvf 97 
                  ++ + + + +p++ ++e +++ ++   ++l+de+ + W vk+ +++ +gr++++kGW++F ka+ ++eg  + Fk++  ++ + +el+v+v+
  Araip.E14YP 178 SHWRMKKMEIPRRVTKELNISLKS--GIMLRDENDKLWPVKI-VTGDRGRCYFAKGWSSFWKAKSVEEGNLCDFKFVvgKEnRAEELLVRVH 266
                  445556799******999666334..5***************.7999999*************************65433346667777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010192.8E-10180IPR003340B3 DNA binding domain
CDDcd100175.39E-18178No hitNo description
PROSITE profilePS5086315.862180IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.0E-19182IPR015300DNA-binding pseudobarrel domain
PfamPF023626.6E-16279IPR003340B3 DNA binding domain
SuperFamilySSF1019364.51E-19285IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.16E-16169251IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.9E-15169254IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.462170268IPR003340B3 DNA binding domain
CDDcd100172.02E-10171267No hitNo description
SMARTSM010191.9E-6173259IPR003340B3 DNA binding domain
PfamPF023623.0E-12175266IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
RIPKAFSAKF INANIVRKTA LVDHEGNSWD VELKKMEDGL LVLKNGWKEF ARDKCLEQAD  60
FLVFEYDGNS KFHVKIFSKS GCRKEAAISG KLNPVMISDD EDSDLQNSKR KHERGLKRKL  120
SPITALKLNQ KSHSKKGTTV RKSKRVKNGA NGSNCESKAS GLVKFVPLKD PHFVTPMSHW  180
RMKKMEIPRR VTKELNISLK SGIMLRDEND KLWPVKIVTG DRGRCYFAKG WSSFWKAKSV  240
EEGNLCDFKF VVGKENRAEE LLVRVHSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.E14YP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025662664.10.0putative B3 domain-containing protein At5g66980
TrEMBLA0A445CNW50.0A0A445CNW5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF143221518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.13e-33B3 family protein