PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.CX0J5
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 424aa    MW: 47895.3 Da    PI: 9.4206
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.CX0J5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.71.2e-09289334454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   h + ErrRR++ N++f eLr llP+      +K  K+++L+ A e +ksL
  Araip.CX0J5 289 RHIILERRRRENENKCFRELRALLPPG-----TKKHKSSVLTAAKEALKSL 334
                  5999*********************97.....799**********999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-12283344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.999285334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.28E-8285334No hitNo description
PfamPF000103.0E-7289334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-9289346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-8291340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MDGVFNLPEA TRSDFLRSLL HTFGCTYICL WHCHSSSNNL LFLDGIYNNV SSTVAEETLF  60
NLYQRLTFDA ASDEYVGSWC GFQEANGLFR ASTIGSSKTC IRSYPNTILS GKEARIERAI  120
FMGCSKGEIE LGFSTIPQID MKAAVKSLFP EDFSRQQIHH PASSSSSSCP SHEFSSLRGV  180
LLPAPEGEQE AIIRAILHVI SSSSSPATAT SQPPPYNNSA FRAYSSTAYN LVTSSSSSRF  240
SLMKRSIEFS RTLHLMRIRD RFHFQHQHQL PHHPLIIDTQ NANNNKHLRH IILERRRREN  300
ENKCFRELRA LLPPGTKKHK SSVLTAAKEA LKSLIAEIEK LNIRNQHGVL SHHRQSDIMI  360
RILEFLKNLQ NLSFVSMATN TSTNTQGTTI NQIIFRLRIL QGSEWDESGF VEAVRRIVSN  420
LIRN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1293298ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.CX0J5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025676738.10.0putative transcription factor bHLH041
TrEMBLA0A445AUN00.0A0A445AUN0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.14e-19bHLH family protein