PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YH6P6
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ARR-B
Protein Properties Length: 436aa    MW: 48990.4 Da    PI: 4.8117
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YH6P6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like58.31.6e-18180231255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  +r+rWt  LH +F+eav    Gs  A Pk+i e m+v+g+t ehv S LQkYR 
  Aradu.YH6P6 180 KRIRWTDHLHMKFMEAVILA-GSG-AGPKKIHEYMNVPGVTKEHVSSYLQKYRQ 231
                  79***************755.766.9***************************6 PP
2Response_reg53.31.5e-18171211107
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEE CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdf 97 
                   vl+vd + + + l  ++l+  gy ev +a+ g++al ++++++ +l+++ i +p+m+ +el+ +ire+  ++p  +++a ++++   +al+ Gak +
   Aradu.YH6P6  17 VLVVDCDSTSLTLASKMLRILGY-EVVTAKLGSDALSIIEKNELHLVIMEIHLPDMKMFELIDKIRESY-DIPSFIMSADENQTSKSKALSKGAKLY 111
                   89*********************.*******************************************88.*************************** PP

                   EESS--HHHH CS
  Response_reg  98 lsKpfdpeel 107
                   + Kp   ++l
   Aradu.YH6P6 112 FIKPLLLSDL 121
                   ****876665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521729.96E-2413127IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23004.4E-2714126No hitNo description
SMARTSM004481.0E-1215125IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011029.97216129IPR001789Signal transduction response regulator, receiver domain
PfamPF000729.5E-1517121IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.94E-1818122No hitNo description
Gene3DG3DSA:1.10.10.609.7E-19177234IPR009057Homeodomain-like
SuperFamilySSF466891.08E-12177234IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-15180231IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MDYGNNKYTI PIPGIKVLVV DCDSTSLTLA SKMLRILGYE VVTAKLGSDA LSIIEKNELH  60
LVIMEIHLPD MKMFELIDKI RESYDIPSFI MSADENQTSK SKALSKGAKL YFIKPLLLSD  120
LKGLWKFASC NTKVSTVSTD QNGSKGITVN KDQECKPLNN NNNKEKKQEL VESSVVQRRK  180
RIRWTDHLHM KFMEAVILAG SGAGPKKIHE YMNVPGVTKE HVSSYLQKYR QSLKAQDSEI  240
QYQRKMLSSE LNLRSYQLKD LFHCKSEQFL DAPAHLPSTK IPTVHEPALS QNQLLPGTLV  300
QGEMNGNGVE SVEISQEESY TNGRVSEEDQ LDPSEDFETI MTNTEPCFTS WSRLLDPEET  360
SYEVSSKDYT AENSELNCSM PMENDMCQQF PAFPSVPSGN VDEIFNISKE TENASNKDSE  420
EATLIVEGIT LNDAVT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.YH6P6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025658840.20.0two-component response regulator ARR12
TrEMBLA0A445E6040.0A0A445E604_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1436288
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.19e-30response regulator 2