PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.W5BH1
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Nin-like
Protein Properties Length: 363aa    MW: 40985.9 Da    PI: 5.5826
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.W5BH1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK72.36.2e-23267314451
       RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                  +++l+d + yF+ pi++A++++++c+Tv+K+iCR+ G++RWP+Rkiks
  Aradu.W5BH1 267 KMKLDDFAPYFHFPIEEASRQMNICPTVVKKICRKEGLSRWPYRKIKS 314
                  78999******************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.257248335IPR003035RWP-RK domain
PfamPF020422.3E-20268314IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MDNPYFVVPY HDPYDTPPLS PSFFNISNPT LLDLTNVSSG TESRHSQQKS NGIQEANLQP  60
TFDPMIQDNN SVGGTGGNNF ESIPLLQVHS EEGPSHDFNN DVNTITLSHW PLPPVPFSCS  120
CCSILREIVH TNGFNFTKVE IHGRPGLISH AIQHPTVNGD FVSTGNLQYQ MIDFCRRSID  180
DVKNFLVEYC RVQSAAGYFM LQDPLSAYYE ALCTGLEWVE EFSDDTDDLN ASNSDDENEQ  240
VADNGVGASG KAPRRLSLSE QRDRAGKMKL DDFAPYFHFP IEEASRQMNI CPTVVKKICR  300
KEGLSRWPYR KIKSTVRQIS QLKRTMESKD ERSKARIQAE IYWLHLKLRE ICAGRYPSGI  360
VIP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.W5BH1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945524.10.0uncharacterized protein LOC107470643
TrEMBLA0A444X6E30.0A0A444X6E3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74782846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-14NIN like protein 7