PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.JE2H0
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ARR-B
Protein Properties Length: 317aa    MW: 36222.3 Da    PI: 6.5787
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.JE2H0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like49.31.1e-15198242146
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 
                  kpr  Wt+e H+ Fv+a+ qL G++kA+P++ilelm+++gL +e+v
  Aradu.JE2H0 198 KPRFIWTTERHQMFVDAILQL-GIDKAVPRKILELMDIPGLRRENV 242
                  79*******************.********************9998 PP
2G2-like315.7e-102432673256
      G2-like  32 ilelmkvkgLtlehvkSHLQkYRla 56 
                  ilelm+++gL +e+v+SHLQkYR++
  Aradu.JE2H0 243 ILELMDIPGLRRENVASHLQKYRMH 267
                  99*********************96 PP
3Response_reg46.22.4e-16351481109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.S.EHHHHHHHHHHHTTTSEEEEEESTTT..HHHHHHHH. CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.m.dGlellkeireeepklpiivvtahge..eedaleal. 90 
                   +l+vd +   ++l++ ++ + +y +v+++ +g+ al+ll+e+   +D++l+D  mpg m dG++ll +  +e  ++p++++ a+++  ++ + e + 
   Aradu.JE2H0  35 LLVVDHDLEHLRLIQDMAFQCNY-QVTTCFEGSYALNLLRESSgcFDVVLCDFHMPGiMdDGSRLLDHVLQEF-NIPVVMMCATDDesSSAVMEGMk 129
                   589999999**************.*********************************636*********8888.799988886655457889999*9 PP

                   HTTESEEEESS--HHHHHH CS
  Response_reg  91 kaGakdflsKpfdpeelvk 109
                   k Ga   l+Kp ++++l++
   Aradu.JE2H0 130 KKGACYNLVKPLSEQDLRN 148
                   9***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.3E-2333178No hitNo description
SMARTSM004483.6E-833150IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521721.07E-2033157IPR011006CheY-like superfamily
PROSITE profilePS5011026.77334154IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.07E-1236153No hitNo description
PfamPF000725.8E-1236149IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF466892.87E-9196242IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-15196242IPR009057Homeodomain-like
TIGRFAMsTIGR015576.6E-13198242IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.2E-9243270IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MAANNNPHSL TDQNANSMPL LILDHQFSTT TALRLLVVDH DLEHLRLIQD MAFQCNYQVT  60
TCFEGSYALN LLRESSGCFD VVLCDFHMPG IMDDGSRLLD HVLQEFNIPV VMMCATDDES  120
SSAVMEGMKK KGACYNLVKP LSEQDLRNIW QNVVEKTQKE VCYDDDESKG TVNRRKRSLS  180
TERDDHDHDV QPNTPNKKPR FIWTTERHQM FVDAILQLGI DKAVPRKILE LMDIPGLRRE  240
NVILELMDIP GLRRENVASH LQKYRMHLKK KSEETKQTNS DGKINVNREA NKQLCASLRV  300
QASTNIPQIT QTLCAKT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-14194272164ARR10-B
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.JE2H0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015957171.10.0two-component response regulator ARR14-like
TrEMBLA0A444ZUP20.0A0A444ZUP2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2095424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-51response regulator 2