PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.83Z01
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 281aa    MW: 30656.1 Da    PI: 7.0647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.83Z01genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-20123172255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++GVr+++ +grW AeIrdp   ++rkr++lg+f+taeeAa+ ++aa+ k++g
  Aradu.83Z01 123 RFRGVRQRP-WGRWTAEIRDP---NRRKRVWLGTFDTAEEAAAVYDAAAVKFKG 172
                  59*******.**********8...335**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381231.2E-587281IPR017392AP2/ERF transcription factor ERF/PTI6
PROSITE profilePS5103224.197123180IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-29123180IPR001471AP2/ERF domain
SMARTSM003803.0E-34123186IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-21123180IPR016177DNA-binding domain
CDDcd000182.13E-18123180No hitNo description
PfamPF008471.9E-13123172IPR001471AP2/ERF domain
PRINTSPR003671.4E-10124135IPR001471AP2/ERF domain
PRINTSPR003671.4E-10146162IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MSAHSTLKLQ NLAIRSSSFD FEGDPPCKTA KRLRSKKLLR IILTDPDATD SESSNDEAEE  60
QTPSPRVKRE IITHIMTPRL HSSHSSSPTA SSSPSPSIGS GQNHVDRNRF KRKIKRTISG  120
SGRFRGVRQR PWGRWTAEIR DPNRRKRVWL GTFDTAEEAA AVYDAAAVKF KGPGAAINFP  180
RGDSEVSGES FAVVSGEGFV AVSGSRGGFA SPTSVLAYDD GVVGGCETTP FEGLRYGDVD  240
AFGFDIDVPL SLMGVNSVLT QRFGKEEFGE LDPEDFLTWP E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-181221801372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.83Z01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015949160.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A445EVK61e-176A0A445EVK6_ARAHY; Uncharacterized protein
STRINGXP_004500382.13e-80(Cicer arietinum)
STRINGXP_004500384.13e-80(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.16e-20cytokinin response factor 4