PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010908.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 176aa    MW: 20159.7 Da    PI: 6.531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010908.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2491.5e-15352154
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                 ++ykGVr++k +grW+AeIr p+    +  r +lg+f+ ae Aa+a+  a+k+++
  Aco010908.1  3 PKYKGVRQRK-WGRWAAEIRNPV----SgCREWLGTFDNAEAAAAAYQSAAKQFK 52
                 79*******9.**********74....44889***************99999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.41E-15335No hitNo description
PfamPF008475.8E-10351IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.9E-22456IPR001471AP2/ERF domain
PROSITE profilePS5103219.401466IPR001471AP2/ERF domain
SMARTSM003803.9E-18470IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-16452IPR016177DNA-binding domain
PRINTSPR003671.7E-8516IPR001471AP2/ERF domain
PRINTSPR003671.7E-82743IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MNPKYKGVRQ RKWGRWAAEI RNPVSGCREW LGTFDNAEAA AAAYQSAAKQ FKAKRSRNAD  60
DNTFFMKCDL AALNKMPFWA AMRRLESEIL VPPPATTAEN RPNHIEKCFA MKNLSTEQQQ  120
KHSSIPIDTF VKFETTLDEA FDYGKRQLSD FVIDIDVSDL IKLDGWFEYE YSDSD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A199VEU91e-127A0A199VEU9_ANACO; Ethylene-responsive transcription factor ERF118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.32e-12related to AP2 2