PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn382311

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

NAC

Protein Properties

Length: 286aa MW: 33430.4 Da PI: 6.9508

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn382311	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149	2.3e-46	11	138	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+++yLk+ + gk++ + ++i ++iy++ P dLp+ +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ls+ ++ Achn382311 11 LPGFRFHPTEEELINFYLKNMIFGKRMCF-DIIGVLNIYQHVPGDLPRLAKIGEREWYFFVPRDRKHGHGGRPNRTTETGFWKATGSDRKILSStdPKK 108 59**********************988.99***********8888899***********************************977677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfykgrap+g ktdW+m+eyrl Achn382311 109 MIGLKKTLVFYKGRAPRGCKTDWIMNEYRL 138 8*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.1E-54	7	156	IPR003441	NAC domain
PROSITE profile	PS51005	51.933	10	156	IPR003441	NAC domain
Pfam	PF02365	5.2E-25	12	138	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence Send to blast
MEESSSEFDQ LPGFRFHPTE EELINFYLKN MIFGKRMCFD IIGVLNIYQH VPGDLPRLAK 60 IGEREWYFFV PRDRKHGHGG RPNRTTETGF WKATGSDRKI LSSTDPKKMI GLKKTLVFYK 120 GRAPRGCKTD WIMNEYRLPD TCPSPKDMVL CKIYRKATSM KVLEQRAAME EEMKTFHQLE 180 PSPPMTPPMD TISFSSSQHE DYFMAPMASH YDMAFKIEDE FEDENRFIVQ EKREVAALHL 240 PIGKEKLPEL QVPRLSMDWT QDPFWTQLRS PWLDNLTPYA NVLNF*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-44	3	156	8	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028061344.1	1e-143	NAC domain-containing protein 22-like
Swissprot	Q10S65	4e-99	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2R6QQE1	0.0	A0A2R6QQE1_ACTCH; NAC domain-containing protein
STRING	XP_008236110.1	1e-127	(Prunus mume)
STRING	XP_002525740.1	1e-126	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-109	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]