PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn382311 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 286aa MW: 33430.4 Da PI: 6.9508 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 149 | 2.3e-46 | 11 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+++yLk+ + gk++ + ++i ++iy++ P dLp+ +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ls+ ++ Achn382311 11 LPGFRFHPTEEELINFYLKNMIFGKRMCF-DIIGVLNIYQHVPGDLPRLAKIGEREWYFFVPRDRKHGHGGRPNRTTETGFWKATGSDRKILSStdPKK 108 59************************988.99***************8888899***************************************977677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfykgrap+g ktdW+m+eyrl Achn382311 109 MIGLKKTLVFYKGRAPRGCKTDWIMNEYRL 138 8***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.1E-54 | 7 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 51.933 | 10 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-25 | 12 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MEESSSEFDQ LPGFRFHPTE EELINFYLKN MIFGKRMCFD IIGVLNIYQH VPGDLPRLAK 60 IGEREWYFFV PRDRKHGHGG RPNRTTETGF WKATGSDRKI LSSTDPKKMI GLKKTLVFYK 120 GRAPRGCKTD WIMNEYRLPD TCPSPKDMVL CKIYRKATSM KVLEQRAAME EEMKTFHQLE 180 PSPPMTPPMD TISFSSSQHE DYFMAPMASH YDMAFKIEDE FEDENRFIVQ EKREVAALHL 240 PIGKEKLPEL QVPRLSMDWT QDPFWTQLRS PWLDNLTPYA NVLNF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-44 | 3 | 156 | 8 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028061344.1 | 1e-143 | NAC domain-containing protein 22-like | ||||
Swissprot | Q10S65 | 4e-99 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2R6QQE1 | 0.0 | A0A2R6QQE1_ACTCH; NAC domain-containing protein | ||||
STRING | XP_008236110.1 | 1e-127 | (Prunus mume) | ||||
STRING | XP_002525740.1 | 1e-126 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-109 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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