PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn363171
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 287aa    MW: 32932.8 Da    PI: 6.7219
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn363171genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM149.31.9e-46111382128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                  pGfrFhPt+eel+ +yLk+ v gkkl+l +vi  ++iy ++P dLp ++k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ls    ++
  Achn363171  11 LPGFRFHPTEEELLEFYLKNMVFGKKLHL-DVIGFINIYLHDPVDLPGMAKMGEREWYFFVPRDRKHGSGGRPNRTTETGFWKATGSDRKILSLsdPKK 108
                 59***************************.99***************8888999*************************************99766778 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +glkktLvfykgrap+g ktdWvm+eyrl
  Achn363171 109 IIGLKKTLVFYKGRAPRGCKTDWVMNEYRL 138
                 8***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-569156IPR003441NAC domain
PROSITE profilePS5100553.12110156IPR003441NAC domain
PfamPF023653.6E-2512138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MEESTSSELQ LPGFRFHPTE EELLEFYLKN MVFGKKLHLD VIGFINIYLH DPVDLPGMAK  60
MGEREWYFFV PRDRKHGSGG RPNRTTETGF WKATGSDRKI LSLSDPKKII GLKKTLVFYK  120
GRAPRGCKTD WVMNEYRLPD SCPSPKDIVL CKIYRKATSL KVLEERAAIE EEMKTSHAFQ  180
PSPPLTHPMD TISYGSPHEE YSTAPMAAQH MAFKKEEDMF IVDEKWYEEA TENKGTTSSL  240
ILPSGKEKPE LQVPKLIMDW TQDPCWTQLR SPWLDNLTPL ANLLNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-4621566168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028061344.11e-150NAC domain-containing protein 22-like
SwissprotQ10S653e-99NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A2R6QI170.0A0A2R6QI17_ACTCH; NAC domain-containing protein
STRINGXP_008382468.11e-132(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35312248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-112NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]