PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn363171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 287aa MW: 32932.8 Da PI: 6.7219 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 149.3 | 1.9e-46 | 11 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+ +yLk+ v gkkl+l +vi ++iy ++P dLp ++k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ls ++ Achn363171 11 LPGFRFHPTEEELLEFYLKNMVFGKKLHL-DVIGFINIYLHDPVDLPGMAKMGEREWYFFVPRDRKHGSGGRPNRTTETGFWKATGSDRKILSLsdPKK 108 59***************************.99***************8888999*************************************99766778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfykgrap+g ktdWvm+eyrl Achn363171 109 IIGLKKTLVFYKGRAPRGCKTDWVMNEYRL 138 8***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.7E-56 | 9 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.121 | 10 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.6E-25 | 12 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence Send to blast |
MEESTSSELQ LPGFRFHPTE EELLEFYLKN MVFGKKLHLD VIGFINIYLH DPVDLPGMAK 60 MGEREWYFFV PRDRKHGSGG RPNRTTETGF WKATGSDRKI LSLSDPKKII GLKKTLVFYK 120 GRAPRGCKTD WVMNEYRLPD SCPSPKDIVL CKIYRKATSL KVLEERAAIE EEMKTSHAFQ 180 PSPPLTHPMD TISYGSPHEE YSTAPMAAQH MAFKKEEDMF IVDEKWYEEA TENKGTTSSL 240 ILPSGKEKPE LQVPKLIMDW TQDPCWTQLR SPWLDNLTPL ANLLNF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-46 | 2 | 156 | 6 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028061344.1 | 1e-150 | NAC domain-containing protein 22-like | ||||
Swissprot | Q10S65 | 3e-99 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2R6QI17 | 0.0 | A0A2R6QI17_ACTCH; NAC domain-containing protein | ||||
STRING | XP_008382468.1 | 1e-132 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-112 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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