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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn331661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 26664 Da PI: 4.9345 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.6e-19 | 107 | 157 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp ++g +r++lg+f tae+Aa a+++a+ +++g Achn331661 107 HYRGVRRRP-WGKFAAEIRDPAKGG--ARVWLGTFETAEDAALAYDRAAYRMRG 157 8********.**********97765..*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.17E-29 | 106 | 165 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.6E-31 | 106 | 165 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.2E-13 | 107 | 157 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.381 | 107 | 165 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.0E-36 | 107 | 171 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.12E-23 | 107 | 167 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 6.1E-11 | 108 | 119 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.1E-11 | 131 | 147 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001944 | Biological Process | vasculature development | ||||
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0051301 | Biological Process | cell division | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MAEAEFDADL ALLESITRHL LTESELAPEI SGYAPAAHCL GTDYWGDLPL KENDSEDMLV 60 YNVLNGGLLQ QETAAGALAG IGSFPAAAPK MEAPEVMPVV VPEKGKHYRG VRRRPWGKFA 120 AEIRDPAKGG ARVWLGTFET AEDAALAYDR AAYRMRGSRA LLNFPLRINS GEPEPVRVRS 180 KRASPERSFS SASSEDGSSK RRKKAVAAAA AEPVVVQPKL EVVGDELDFA QIWDYSTWQE 240 SIGSGC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-41 | 104 | 172 | 2 | 70 | ATERF1 |
3gcc_A | 2e-41 | 104 | 172 | 2 | 70 | ATERF1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Involved in disease resistance pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630, ECO:0000269|PubMed:9756931}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00548 | DAP | Transfer from AT5G47220 | Download |
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Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by jasmonate (JA) and Alternaria brassicicola (locally and systemically). Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2) while wounding induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028112381.1 | 4e-75 | ethylene-responsive transcription factor 1A-like | ||||
Swissprot | O80338 | 3e-68 | EF101_ARATH; Ethylene-responsive transcription factor 2 | ||||
TrEMBL | A0A2R6QNT8 | 1e-176 | A0A2R6QNT8_ACTCH; Ethylene-responsive transcription factor | ||||
STRING | EOY24233 | 4e-72 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4054 | 22 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 5e-49 | ethylene responsive element binding factor 2 |
Publications ? help Back to Top | |||
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