PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn326001
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 116aa    MW: 12974.6 Da    PI: 4.439
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn326001genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.88e-143678649
         NAM  6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                rFhP+ eelvv+yLkkkv++ +l++ ++i+evd+yk++Pw+L+ 
  Achn326001 36 RFHPNCEELVVQYLKKKVASAPLPV-SIIAEVDLYKFDPWELQG 78
                9************************.89**************84 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.42131115IPR003441NAC domain
SuperFamilySSF1019411.83E-133580IPR003441NAC domain
PfamPF023653.1E-43673IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MQPARRTLQP DPDVSNMTPE MGYELVTAAD PSTNPRFHPN CEELVVQYLK KKVASAPLPV  60
SIIAEVDLYK FDPWELQGHV WEARVVLLQS EGQEVPEWGE AKQGSNFRVL ENNGN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF3190462e-76KF319046.1 Actinidia arguta NAC protein 1 (NAC1) mRNA, complete cds.
GenBankKF3190502e-76KF319050.1 Actinidia chinensis NAC protein 1 (NAC1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A426YVW84e-26A0A426YVW8_ENSVE; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.12e-18NAC domain containing protein 2