PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn326001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 116aa MW: 12974.6 Da PI: 4.439 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.8 | 8e-14 | 36 | 78 | 6 | 49 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 rFhP+ eelvv+yLkkkv++ +l++ ++i+evd+yk++Pw+L+ Achn326001 36 RFHPNCEELVVQYLKKKVASAPLPV-SIIAEVDLYKFDPWELQG 78 9************************.89**************84 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 13.421 | 31 | 115 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.83E-13 | 35 | 80 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-4 | 36 | 73 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence Send to blast |
MQPARRTLQP DPDVSNMTPE MGYELVTAAD PSTNPRFHPN CEELVVQYLK KKVASAPLPV 60 SIIAEVDLYK FDPWELQGHV WEARVVLLQS EGQEVPEWGE AKQGSNFRVL ENNGN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF319046 | 2e-76 | KF319046.1 Actinidia arguta NAC protein 1 (NAC1) mRNA, complete cds. | |||
GenBank | KF319050 | 2e-76 | KF319050.1 Actinidia chinensis NAC protein 1 (NAC1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A426YVW8 | 4e-26 | A0A426YVW8_ENSVE; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 2e-18 | NAC domain containing protein 2 |