PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn019581

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

NAC

Protein Properties

Length: 287aa MW: 32849.8 Da PI: 7.6262

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn019581	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149.9	1.2e-46	11	138	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+ +yLk+ v gkkl+l +vi+ ++iy+++P +Lp +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ls ++ Achn019581 11 LPGFRFHPTEEELLGFYLKNMVFGKKLHL-DVISFINIYHHDPVELPGLAKIGEREWYFFVPRDRKHGSGGRPNRTTETGFWKATGSDRKILSLsdPKK 108 59*************************.99***********8888899*********************************99766778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfykgrap+g ktdWvm+eyrl Achn019581 109 IIGLKKTLVFYKGRAPRGCKTDWVMNEYRL 138 8*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.66E-56	8	156	IPR003441	NAC domain
PROSITE profile	PS51005	53.157	10	156	IPR003441	NAC domain
Pfam	PF02365	5.0E-25	12	138	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence Send to blast
MEESTSSNLQ LPGFRFHPTE EELLGFYLKN MVFGKKLHLD VISFINIYHH DPVELPGLAK 60 IGEREWYFFV PRDRKHGSGG RPNRTTETGF WKATGSDRKI LSLSDPKKII GLKKTLVFYK 120 GRAPRGCKTD WVMNEYRLPD SCPSPKDIVL CKIYRKATSL KVLEERAAME EDMKTNPAFQ 180 PSPPLTPPMD TISYSNPHEE YSTAPMTAHM VFKKEEEDML LVAEKWYEEA TENKGTTSSL 240 ILPSGKEKPV LQMPKLSMDW TQDSFWTQLR SPWLDNLTPL ASLLNF*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-44	12	161	19	170	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-44	12	161	19	170	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-44	12	161	19	170	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-44	12	161	19	170	NO APICAL MERISTEM PROTEIN
3swm_A	2e-44	12	161	22	173	NAC domain-containing protein 19
3swm_B	2e-44	12	161	22	173	NAC domain-containing protein 19
3swm_C	2e-44	12	161	22	173	NAC domain-containing protein 19
3swm_D	2e-44	12	161	22	173	NAC domain-containing protein 19
3swp_A	2e-44	12	161	22	173	NAC domain-containing protein 19
3swp_B	2e-44	12	161	22	173	NAC domain-containing protein 19
3swp_C	2e-44	12	161	22	173	NAC domain-containing protein 19
3swp_D	2e-44	12	161	22	173	NAC domain-containing protein 19
4dul_A	2e-44	12	161	19	170	NAC domain-containing protein 19
4dul_B	2e-44	12	161	19	170	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028061344.1	1e-145	NAC domain-containing protein 22-like
Swissprot	Q10S65	9e-97	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2R6R706	0.0	A0A2R6R706_ACTCH; NAC domain-containing protein
STRING	XP_002525740.1	1e-131	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-109	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]