PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn019581 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 287aa MW: 32849.8 Da PI: 7.6262 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 149.9 | 1.2e-46 | 11 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+ +yLk+ v gkkl+l +vi+ ++iy+++P +Lp +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ls ++ Achn019581 11 LPGFRFHPTEEELLGFYLKNMVFGKKLHL-DVISFINIYHHDPVELPGLAKIGEREWYFFVPRDRKHGSGGRPNRTTETGFWKATGSDRKILSLsdPKK 108 59***************************.99***************8888899*************************************99766778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfykgrap+g ktdWvm+eyrl Achn019581 109 IIGLKKTLVFYKGRAPRGCKTDWVMNEYRL 138 8***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-56 | 8 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.157 | 10 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.0E-25 | 12 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence Send to blast |
MEESTSSNLQ LPGFRFHPTE EELLGFYLKN MVFGKKLHLD VISFINIYHH DPVELPGLAK 60 IGEREWYFFV PRDRKHGSGG RPNRTTETGF WKATGSDRKI LSLSDPKKII GLKKTLVFYK 120 GRAPRGCKTD WVMNEYRLPD SCPSPKDIVL CKIYRKATSL KVLEERAAME EDMKTNPAFQ 180 PSPPLTPPMD TISYSNPHEE YSTAPMTAHM VFKKEEEDML LVAEKWYEEA TENKGTTSSL 240 ILPSGKEKPV LQMPKLSMDW TQDSFWTQLR SPWLDNLTPL ASLLNF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-44 | 12 | 161 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-44 | 12 | 161 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-44 | 12 | 161 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-44 | 12 | 161 | 19 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-44 | 12 | 161 | 22 | 173 | NAC domain-containing protein 19 |
3swm_B | 2e-44 | 12 | 161 | 22 | 173 | NAC domain-containing protein 19 |
3swm_C | 2e-44 | 12 | 161 | 22 | 173 | NAC domain-containing protein 19 |
3swm_D | 2e-44 | 12 | 161 | 22 | 173 | NAC domain-containing protein 19 |
3swp_A | 2e-44 | 12 | 161 | 22 | 173 | NAC domain-containing protein 19 |
3swp_B | 2e-44 | 12 | 161 | 22 | 173 | NAC domain-containing protein 19 |
3swp_C | 2e-44 | 12 | 161 | 22 | 173 | NAC domain-containing protein 19 |
3swp_D | 2e-44 | 12 | 161 | 22 | 173 | NAC domain-containing protein 19 |
4dul_A | 2e-44 | 12 | 161 | 19 | 170 | NAC domain-containing protein 19 |
4dul_B | 2e-44 | 12 | 161 | 19 | 170 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028061344.1 | 1e-145 | NAC domain-containing protein 22-like | ||||
Swissprot | Q10S65 | 9e-97 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2R6R706 | 0.0 | A0A2R6R706_ACTCH; NAC domain-containing protein | ||||
STRING | XP_002525740.1 | 1e-131 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-109 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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