PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan016969

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

bZIP

Protein Properties

Length: 329aa MW: 34671.2 Da PI: 9.2329

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-37574	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	71.2	1.6e-22	186	248	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv +L++eN +Lk+e+++l+++++klk ++ Aan016969 186 ERELKRERRKQSNRESARRSRLRKQAEAEELAIKVGALTSENLTLKSEINRLTDNSKKLKFQN 248 89*********************************************************9776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF16596	2.1E-14	45	123	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.8E-16	183	247	No hit	No description
Pfam	PF00170	1.7E-20	186	248	IPR004827	Basic-leucine zipper domain
SMART	SM00338	1.1E-18	186	250	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	12.403	188	251	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.0E-10	189	246	No hit	No description
CDD	cd14702	2.98E-18	191	238	No hit	No description
PROSITE pattern	PS00036	0	193	208	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence Send to blast
PQHMMPPYAA MYPHGGVYPH PGVPLGSPLS IDSPAKSSGN PXPGGLMKKL KGFDGLAMSI 60 GNGNGNGNGN GNGAVGGNDN GFSHSGETEG SSEGSDGNTT EGGQNSGKRS REESPNAPAK 120 VGKTEPLSDE VFPAEPNGAS KKLTGLSVTP VKVLSDSDLK KSPSATSVMT SATLAMVPNE 180 ALLQNERELK RERRKQSNRE SARRSRLRKQ AEAEELAIKV GALTSENLTL KSEINRLTDN 240 SKKLKFQNIK LMEKLKNAQQ EPNIEDPRLD TKGLSLSTAN LLSKVDNSSS SSSGNEEGEV 300 YEGNINQKPS AKLHQLLDAS PRADAVAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	208	RRSRLRK
2	202	209	RRSRLRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Aan.8675	0.0	trichome

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By light.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024993193.1	1e-157	common plant regulatory factor 1-like isoform X1
Swissprot	Q99089	7e-88	CPRF1_PETCR; Common plant regulatory factor 1
TrEMBL	A0A2U1MVE5	0.0	A0A2U1MVE5_ARTAN; Common plant regulatory factor 1
STRING	VIT_15s0046g01440.t01	7e-96	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-45	G-box binding factor 3

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115] Feldbrügge M,Hahlbrock K,Weisshaar B The transcriptional regulator CPRF1: expression analysis and gene structure. Mol. Gen. Genet., 1996. 251(6): p. 619-27 [PMID:8757392]