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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan016565 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||
Protein Properties | Length: 237aa MW: 25110.6 Da PI: 7.2125 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 38.2 | 2.9e-12 | 2 | 38 | 24 | 59 |
EEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 24 YYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 YYr +a gCpv+k+v+r+ +d++++++tYeg+H h+ Aan016565 2 YYRAQMAvGCPVRKQVQRCFDDQTILITTYEGTHSHP 38 ******99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 15.262 | 1 | 40 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.2E-10 | 2 | 38 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.7E-5 | 2 | 39 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.8E-12 | 2 | 40 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.41E-10 | 2 | 40 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
XYYRAQMAVG CPVRKQVQRC FDDQTILITT YEGTHSHPLP PAAMAMASTT SAAASMLLSG 60 SMSSADSMMN PNILARSILP NTSSIATISS SAPFPTVTLD LTHNPNQIQR NNNSTQFQAP 120 HQGQLSSQNF APIATMPLQS MSTNQSKFSD LQLSHDIESS QLVAPNKGQQ QTSFADSLSA 180 ATAVITADPN FTAALAAAIT SIMSGSNTTT TNASHTSTTT NTNLFSNNHK TSNFQGN |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Roots, leaves, shoots, flowers and siliques. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023759449.1 | 9e-89 | WRKY transcription factor 6-like | ||||
Swissprot | Q9C519 | 3e-53 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
Swissprot | Q9XEC3 | 2e-53 | WRK42_ARATH; WRKY transcription factor 42 | ||||
TrEMBL | A0A2U1NJT3 | 1e-127 | A0A2U1NJT3_ARTAN; WRKY1 | ||||
TrEMBL | A0A2U1NJX7 | 1e-127 | A0A2U1NJX7_ARTAN; WRKY1 | ||||
STRING | VIT_10s0116g01200.t01 | 6e-73 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 2e-36 | WRKY family protein |