PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015157
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ARR-B
Protein Properties Length: 586aa    MW: 64461.1 Da    PI: 7.0662
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-590160994PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.66e-28209262155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  Aan015157 209 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 262
                79*******************.********************************8 PP
2Response_reg82.31.6e-27251331109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vdD+ + +++l+q+l++  y +v++++++++al+ll+e++  +D++l D+ mp+mdG++ll+     e++lp+i+++a g  +++l+ ++ Ga 
     Aan015157  25 VLVVDDDVICLKILEQMLRRCSY-NVTTCSQATAALNLLRERKgcFDVVLSDVHMPDMDGFKLLELVGL-EMDLPVIMISADGRTNLVLRGIRHGAC 119
                   89*********************.****************************************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +e+l +
     Aan015157 120 DYLIKPIREEQLKN 133
                   ***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521722.28E-3622147IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.2E-4222159No hitNo description
SMARTSM004482.0E-3023135IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.48924139IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.6E-2425133IPR001789Signal transduction response regulator, receiver domain
CDDcd001567.29E-2826139No hitNo description
PROSITE profilePS5129410.029206268IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-29206267IPR009057Homeodomain-like
SuperFamilySSF466894.66E-19207266IPR009057Homeodomain-like
TIGRFAMsTIGR015574.5E-24209262IPR006447Myb domain, plants
PfamPF002497.2E-6211260IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
XARQNSFGSG SDTGVSDQFP VGLRVLVVDD DVICLKILEQ MLRRCSYNVT TCSQATAALN  60
LLRERKGCFD VVLSDVHMPD MDGFKLLELV GLEMDLPVIM ISADGRTNLV LRGIRHGACD  120
YLIKPIREEQ LKNIWQHVIR KKWNENKEHE HSGSVDDKDR QKRGGDDTDY ASSVNEGGDG  180
ILVSHKKRRN VKEEDDGELE TDEPGSSKKP RVVWSVELHQ QFVGAVNQLG IDKAVPKRIL  240
ELMNVPGLTR ENVASHLQKF RLYLRRLSGM AQQGGGPNSF CGSMEQSQQT PKLGPYGRFE  300
IQALAASGQI PPQTLAALHA ELLGRPTANV GLPVIDYQPL LQPSKRMPVD HVMPYGQPNP  360
SNFTKQIPQP IIEDVHSGLG PWHSNNMVGN YGQLGGQNGH NMLMGMSQNQ NQSQQLQKQS  420
ISVQPSRLVV PAQSAADFQG GNNGISVNQT NSYSRSSVID YSPVLPQSDG SSNGVGQRSE  480
RDAKTMGGQS GNNVGERQIS FGESVQVFDQ RPLRNLGFVG KGTSIPSRFA IYEAEAPTSN  540
LYNGDNNAGR RVKQEPNIDF LDNSKAGGIQ IRHHMSQNDL MSVYSE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-22206268264ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024975847.10.0two-component response regulator ORR21-like
RefseqXP_024975848.10.0two-component response regulator ORR21-like
SwissprotA2XE311e-145ORR21_ORYSI; Two-component response regulator ORR21
SwissprotQ8H7S71e-145ORR21_ORYSJ; Two-component response regulator ORR21
TrEMBLA0A2U1MUV70.0A0A2U1MUV7_ARTAN; Two-component response regulator
STRINGVIT_01s0011g05830.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-112response regulator 2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]