PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan007549 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | MYB_related | ||||||||
Protein Properties | Length: 245aa MW: 27778.2 Da PI: 9.9034 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.7 | 5.6e-13 | 37 | 78 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g+W++eEde l+++++++G++ W++ + ++ gR+++ c+ rw+ Aan007549 37 GAWSPEEDEMLLNLFEKHGPN-WSLNGKSIP-GRSANTCRVRWF 78 89*****************77.*********.***********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.578 | 31 | 83 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 7.7E-18 | 34 | 124 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 8.1E-8 | 35 | 83 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.4E-13 | 37 | 79 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 5.9E-12 | 37 | 78 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.67E-9 | 38 | 77 | No hit | No description |
PROSITE profile | PS51294 | 9.791 | 85 | 132 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 4.7E-11 | 85 | 131 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 1.1 | 85 | 130 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 0.0076 | 85 | 128 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MKNKTSLSKY RLRKKKGLRL AMPVNNSQKK DMDQIEGAWS PEEDEMLLNL FEKHGPNWSL 60 NGKSIPGRSA NTCRVRWFSS PQVMPFTPEE DHAILLSHAY YGDKWVSIAK NLIGRPHDVI 120 LNHWNSTLKR KSSSMTNEAK IPPAFVSDIN YGQGNSYIHD WNISLEVAPS ISDMARDNMS 180 SGGTHSCSRD ESAPSRDAFN KRESSPMMTD SDDSSEVSSF EPVRPSRLSR FSSKKRAKMS 240 RFFEA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gv2_A | 1e-20 | 35 | 131 | 3 | 104 | MYB PROTO-ONCOGENE PROTEIN |
1h88_C | 4e-20 | 35 | 131 | 57 | 158 | MYB PROTO-ONCOGENE PROTEIN |
1h89_C | 4e-20 | 35 | 131 | 57 | 158 | MYB PROTO-ONCOGENE PROTEIN |
1mse_C | 1e-20 | 35 | 131 | 3 | 104 | C-Myb DNA-Binding Domain |
1msf_C | 1e-20 | 35 | 131 | 3 | 104 | C-Myb DNA-Binding Domain |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2U1L2L2 | 1e-147 | A0A2U1L2L2_ARTAN; Transcription factor MYB44-like protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 3e-38 | myb domain protein 70 |