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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
AHYPO_013799-RA |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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| Family |
HSF |
| Protein Properties |
Length: 373aa MW: 42361.1 Da PI: 5.3488 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| AHYPO_013799-RA | genome | BYU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 108.7 | 4.3e-34 | 49 | 141 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95
Fl+k++e++ed++++ ++sws++ +sf+v+d+ +++ ++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F+kgkk+ll+
AHYPO_013799-RA 49 FLNKTFEMVEDPKTDPIVSWSTTFDSFIVWDPYKLSIDLLPKYFKHSNFSSFVRQLNTYGFRKVHLDR---------WEFANSGFQKGKKHLLK 133
9****************************************************************999.........***************** PP
XXXXXXXX CS
HSF_DNA-bind 96 kikrkkse 103
++kr++++
AHYPO_013799-RA 134 TVKRRNHT 141
*****875 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MIMEPINKQS SDGSNADVVT IKEEEDEEEE VMVVPKPLQS LQENGPPPFL NKTFEMVEDP 60
KTDPIVSWST TFDSFIVWDP YKLSIDLLPK YFKHSNFSSF VRQLNTYGFR KVHLDRWEFA 120
NSGFQKGKKH LLKTVKRRNH TSNNINSIPL LQKEAELQNL KKEQEALKVE ILDLKQQQQD 180
SDTCLAAMDE RIKSAEWKQK QIILLVAKAM KNTASFQQLL QSYNQKTGLG IEHLCKKRRL 240
TANNSTNSML NTFPEKGIAP NSVPCHKENV RLSESEHMFL GSPNTDLCSQ LVPDRESNFT 300
SETSCSDLCS GNYIMWEKLM EDDVICEDNR KEDAALGVDP SKYVHELEDL IAKPTSLIGF 360
KNVGEIACPI GQ*
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