PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678452181
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 389aa    MW: 41968.7 Da    PI: 9.0005
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678452181genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.74.5e-22245307163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L + N+++k+e++++ ++++klk e+
  678452181 245 EQELKRERRKQSNRESARRSRLRKQAEAEELAGKVQALLSDNMSMKSEIKRMMEQCKKLKHEN 307
                789*********************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.2E-21193IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165969.3E-6116219No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-16237305No hitNo description
SMARTSM003383.0E-19245309IPR004827Basic-leucine zipper domain
PfamPF001701.4E-19245307IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.001247310IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.59E-10248304No hitNo description
CDDcd147021.12E-19250300No hitNo description
PROSITE patternPS000360252267IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MGNSGEEGKN AKKNDKTPPP PATVMNNCHA YPDWSTVQAF YGPCLAMPPY SNSPVTSSPA  60
TPPYMWGPSQ SMIAHYGAPY TAFYAPFAHP GVPVAGGAAP TMESPAKSAG NSGERVLKKH  120
KEIDGLAISI GNGSVDDNDP PTEHQSSDSE ATDGSSHGSN GGLARTAKGH RKRSHQTSPT  180
KEHAKAQKEN VFPSTEAGRA FDAVPSNATG EKSGNVSTPL DFKSMKPTPV DALQPSPSET  240
WLQNEQELKR ERRKQSNRES ARRSRLRKQA EAEELAGKVQ ALLSDNMSMK SEIKRMMEQC  300
KKLKHENGVL MGKLNDTQLR RIDDDHRLKP GEPAITRLKT DPPLATVNLL ARVNNSDGGG  360
GGHSENDGRE VYESRSAPVK LHQLLDAGH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1261267RRSRLRK
2261268RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678452181
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551515.11e-117common plant regulatory factor 1 isoform X2
TrEMBLA0A2G9I9X41e-114A0A2G9I9X4_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-71G-box binding factor 3