PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678416238
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 275aa    MW: 31559.8 Da    PI: 5.3075
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678416238genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.23.9e-29134193260
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                +D ++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s +dp+ ++itY+ eH h+k
  678416238 134 SDMWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSCTDPRKFIITYTAEHSHSK 193
                79*************************998****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-29120194IPR003657WRKY domain
SuperFamilySSF1182903.01E-25127194IPR003657WRKY domain
PROSITE profilePS5081132.845128194IPR003657WRKY domain
SMARTSM007742.5E-33133193IPR003657WRKY domain
PfamPF031061.6E-24135191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MAQFAEDFGD WGLEAIIRGW NCDAQTRGDG NDAYNEDLRF QESFPGIFEV SNQELEDLYK  60
PFYPHPLPSS TLLDFQERRN PEEEEEEKHD NFSGDDHSSG SSSSGRVGYK PKYKKRKSHQ  120
KRVVVHVSAD ELTSDMWAWR KYGQKPIKGS PYPRSYYRCS SSKGCLARKQ VEQSCTDPRK  180
FIITYTAEHS HSKPTKRNSL AGTVRQKFPV SKRSLEEHTS ASVPDVAGGV KEEKQSPGEE  240
ACVKKEAVED YEMSEFLLND DFFAGLEEFD EFFRF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-18122194274WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114118KRKSH
Cis-element ? help Back to Top
SourceLink
PlantRegMap678416238
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081142.23e-86probable WRKY transcription factor 29
TrEMBLA0A0D5Y9B84e-87A0A0D5Y9B8_SALMI; WRKY protein
TrEMBLA0A2G9GRG65e-87A0A2G9GRG6_9LAMI; Uncharacterized protein
STRINGMigut.A00718.1.p7e-81(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-41WRKY family protein