PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678398681
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 1087aa    MW: 121925 Da    PI: 8.6647
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678398681genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.4e-074375337
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtl 37
                     rWTteE  +++d  ++ G++ Wk++a  +  +R++
        678398681 43 RWTTEELTRFYDSYRKCGKD-WKKVACAVK-NRSP 75
                     9*****************99.*****9998.8886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.5E-74088IPR009057Homeodomain-like
SMARTSM011359.3E-54621722IPR033471DIRP domain
PfamPF065842.0E-33621721IPR033471DIRP domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1087 aa     Download sequence    Send to blast
MGPPRKSKSV NKRYDEVSPT KEECGYKRSI SRKRKLTGML GPRWTTEELT RFYDSYRKCG  60
KDWKKVACAV KNRSPDVVEA LYSMNKAYLS LPHGTASAAG LIAMMTDHYS NMVGSDSDRD  120
STGGVGSSRK SRNRARGRIS TTASKVSLDE QYESHSPIKE SSIGCMSLLK GKGSGTRPRP  180
VGKRTPRFPV SFSHQHTNAG IYSSPNKRLK LEDYADYEEV ELALALTEAS QRGGSPQVSG  240
TPCKLSETVV SSDFNHTLRK HADVETKIFP NEMDEEVLEG STEADTRELM RPLGDGTTRK  300
NNRNLEGGNI ETDIHNKDHV DDIKEECSQT EGGHGSHAQG SKLDIEVNDS KVFSPAQTQR  360
KKSKKGLFRE DEGPAFDALQ ALADLSLLMP PENEDVATLQ LKKNQDHADE SVPLEANPSN  420
HSRERCRSSG MRMKGSLLSE GASRRTSKPR KRADFDDGSV LEDKQDPESP ITKTSRKMKK  480
MPVPKKKEAN DDILFTRIPR VEAMDSGKTT VKSRIPPQRG SLNVTKMPEN SCNADAWKES  540
GNSGQSAVQN LGTNQDTLPT KLRCKRKMVS KKPEALKDLT LSDKKASEKS SLPEIASILK  600
KKLSSCLSNQ HLRRFCTFEW FYSAIDYPWF SKREFNEYLN HVGLGHVPRL TRTEWSFIRS  660
SLGKPRRFSQ QFLKQEKEKL NQYRDSVRKH YTELREGTRE GLPTDLARPL SVGQHVIAIH  720
PKTRDIHDGS VLTVDDSRFH VQFYRSDLGV EFVMDIDCMP LNPIENMPAM LGRWTAFADR  780
YFEDNEQKSG GRAEEDMKVS PSNNPENTGG AARLLPFANH DTASLKETKV QAKEADAEAL  840
AELARALDKK EVIVAELRLM NDDVVESQKD GGSSLKDEET FKKQYAAVLM LLNEANEQVS  900
SALCHLRRRN TYLETRQPAS PAANLADNTG TRDPFDRSGD EARSHVDDIM DSSRTKAQMM  960
LDAAIQAMSS LKNRNDNNEK IEEVIDYVND RLPSDETCRQ VVRDQQSVNS PKVVAQYPYD  1020
LIMKCIATMV MIQKCTERQF PPSDVAQILD YAVTSLRPRS SQNLPIYTDI QKCFGIIKNQ  1080
ILALIPT
Cis-element ? help Back to Top
SourceLink
PlantRegMap678398681
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552958.10.0protein ALWAYS EARLY 3-like
RefseqXP_020552959.10.0protein ALWAYS EARLY 3-like
RefseqXP_020552960.10.0protein ALWAYS EARLY 3-like
TrEMBLA0A4D8YXC60.0A0A4D8YXC6_SALSN; Uncharacterized protein
STRINGMigut.G00183.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33122333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.20.0DNA binding