PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678326495
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 190aa    MW: 21080.9 Da    PI: 10.0445
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678326495genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_158.41.5e-1848110163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+e krerrkq+NRe+ArrsR+RK+ae eeL++kv++L++ N  Lk e+++l++ +a lk ++
  678326495  48 EREMKRERRKQSNRESARRSRLRKQAEAEELAKKVQALTSDNLNLKAEMNKLRESSAMLKLQN 110
                799******************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-1543110No hitNo description
SMARTSM003381.1E-1548112IPR004827Basic-leucine zipper domain
PfamPF001704.4E-1748110IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.58750113IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.88E-1151107No hitNo description
CDDcd147021.32E-1353101No hitNo description
PROSITE patternPS0003605570IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MGATRFHLPC NALGFAPKQA ADVQASDKAA AEAKSAPPIP LDAWLQNERE MKRERRKQSN  60
RESARRSRLR KQAEAEELAK KVQALTSDNL NLKAEMNKLR ESSAMLKLQN VALMEKIKDP  120
HLGVTDDNQR VKPVATMNLL ARVNNSSLNE DRDMEDEKTA TAGAVYEGRS DKLHHLLDAK  180
SLRNDAVAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16470RRSRLRK
26471RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678326495
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093363.12e-49common plant regulatory factor 1 isoform X5
RefseqXP_020551517.12e-49common plant regulatory factor 1 isoform X4
SwissprotQ990891e-33CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A0V0ICX07e-48A0A0V0ICX0_SOLCH; Putative transcriptional activator TAF-1-like
TrEMBLA0A2G3BSS92e-47A0A2G3BSS9_CAPCH; Common plant regulatory factor 1
TrEMBLA0A4D9BTJ72e-47A0A4D9BTJ7_SALSN; Plant G-box-binding factor
STRINGSolyc01g095460.2.11e-47(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.13e-35G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]