 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
676776406 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
GeBP |
| Protein Properties |
Length: 269aa MW: 30477.4 Da PI: 8.4301 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676776406 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 93.3 | 2.6e-29 | 59 | 155 | 3 | 98 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyef.vkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98
++r+wseeDe+++L+Gl+d++aktg++p++++d+fy+f v +si k+sk+ql++Ki +LK Kf +++++++g+e+ ++ ++ ++f ls +iWg+
676776406 59 INRIWSEEDELTVLKGLVDYQAKTGVEPKSNWDEFYRFlVGGSIATKFSKDQLLSKISKLKGKFFVRMQRISQGNEQILAGINQADAFRLSTRIWGQ 155
68***********************************93468*****************************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MVNPRHLDFS DISSPSSQSF PQRKSARKHT PKRSPPSEPV TNKTKTKTKN KKKLGLPVIN 60
RIWSEEDELT VLKGLVDYQA KTGVEPKSNW DEFYRFLVGG SIATKFSKDQ LLSKISKLKG 120
KFFVRMQRIS QGNEQILAGI NQADAFRLST RIWGQNDSKD SKTDETCKED EVITYDEPLY 180
ENVVEKSDFE ENDDVDESSC ALRDAFETML SGGLSDYQKK LQLEKLMNLG SGKTKELSDE 240
WKALCAEEVK LNIKKFRFSA MLAEAANGS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | DNA-binding protein, which specifically recognizes the GL1 enhancer sequence (PubMed:12535344). May be involved in leaf initiation (PubMed:12535344). May play redundant roles with GPL1 and GPL2 in cytokinin responses by regulating the transcript levels of type-A ARR response genes (PubMed:18162594). Involved in stress responses (PubMed:21875893). Plays a repressive role in cell expansion by counteracting the positive role of CPR5 in this process, but does not regulate cell proliferation or endoreduplication (PubMed:21875893). May play a role in plant defense (PubMed:29192025). {ECO:0000269|PubMed:12535344, ECO:0000269|PubMed:21875893, ECO:0000269|PubMed:29192025, ECO:0000305|PubMed:18162594}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by KNAT1. Not regulated by gibberellins. {ECO:0000269|PubMed:12535344}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC006053 | 2e-43 | AC006053.3 Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete sequence. |
| GenBank | AY072164 | 2e-43 | AY072164.1 Arabidopsis thaliana unknown protein (At2g25650) mRNA, complete cds. |
| GenBank | AY084223 | 2e-43 | AY084223.1 Arabidopsis thaliana clone 100283 mRNA, complete sequence. |
| GenBank | AY096417 | 2e-43 | AY096417.1 Arabidopsis thaliana unknown protein (At2g25650) mRNA, complete cds. |
| GenBank | CP002685 | 2e-43 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G00270.1 | 4e-67 | DNA-binding storekeeper protein-related transcriptional regulator |
