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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
676733102 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family |
CO-like |
Protein Properties |
Length: 408aa MW: 45956.7 Da PI: 5.2929 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
676733102 | genome | VEGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 25 | 4e-08 | 14 | 57 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
+r C+ + + +++++C ++ +lC++C + H+ H++v
676733102 14 ARACDSCVKRRARWYCAADDAFLCHSCDGSVHSAnplarrHERV 57
578*****************************657888888876 PP
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2 | CCT | 68.5 | 1.8e-23 | 359 | 402 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++
676733102 359 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 402
9*****************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MMKSLANAVG GKTARACDSC VKRRARWYCA ADDAFLCHSC DGSVHSANPL ARRHERVRLK 60 SASAGKHRHA SSSPPHPATW HQGFTRKART PRGGKKSHSM VFHDLVPEMS SEDQNYEVEE 120 QLIFEVPVLN PMVDEQCLNE SVETKIEFPM MPVCFKSSDE EDDNAESCLN GLFPTDMELA 180 QFSADVEILL GGGTDREFHA IEELGLGEML KIEKEEVEEE EEMATREVCD LDVSDETSPF 240 EISFDYDCSH KIAFDKEEED GKEDVMKNVM AVGVNEMSGR IKEEKKEKVL MLSLDYEAVI 300 STWGGQGTPW SALEPPDLDL DMLCCPIDSM GDESGVEAHH HNHFRGLGLH MGEAGDGGRE 360 ARVSRYREKR RTRLFSKKIR YEVRKLNAEK RPRMKGRFVK RSSIAAAH
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 369 | 385 | RRTRLFSKKIRYEVRKL |