 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
65512 |
| Common Name | RR5-1, SELMODRAFT_440049 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
|
| Family |
ARR-B |
| Protein Properties |
Length: 246aa MW: 27823.2 Da PI: 7.8236 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 65512 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 86.6 | 2.4e-27 | 186 | 239 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++W+ +LH++Fv+a++++ G+ekA+Pk+ile+m+++gLt+e+v+SHLQkYRl
65512 186 KARVVWSFDLHQQFVKAINHI-GIEKAVPKRILEVMNIQGLTRENVASHLQKYRL 239
68*******************.********************************8 PP
|
| 2 | Response_reg | 86.8 | 6.1e-29 | 6 | 114 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95
vl+vdD+p + ll+++l++ +y v++++ +++al++l+e++ +D+++ D+ mp+mdG++ll+ i e +p+i+++a+ge + + + + +Ga
65512 6 VLVVDDDPCCLTLLERMLRECKY-AVTTCSRATAALTILRERKesFDVVISDVHMPDMDGFKLLELIGLEM-GIPVIMMSASGETDAVMKGVVYGAC 100
89*********************.***************888888**********************6644.8************************ PP
EEEESS--HHHHHH CS
Response_reg 96 dflsKpfdpeelvk 109
d+l+Kp+ +eel++
65512 101 DYLVKPVRIEELRN 114
************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000160 | Biological Process | phosphorelay signal transduction system |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 246 aa
Download sequence Send
to blast |
PTGLKVLVVD DDPCCLTLLE RMLRECKYAV TTCSRATAAL TILRERKESF DVVISDVHMP 60
DMDGFKLLEL IGLEMGIPVI MMSASGETDA VMKGVVYGAC DYLVKPVRIE ELRNIWQHVV 120
RRRTKDSAVR DEAPEEWEDF MRSTPTDSSE EADVDLRLLR KKKRPSCDFG GGGGDESVRS 180
IASNKKARVV WSFDLHQQFV KAINHIGIEK AVPKRILEVM NIQGLTRENV ASHLQKYRLY 240
LKRLSG
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
| UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
