PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462922446 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 306aa MW: 32770.6 Da PI: 9.1449 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 71.9 | 9.3e-23 | 165 | 227 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L++e+++l++ ++kl++e+ 462922446 165 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRSEINKLTESSQKLRMEN 227 689*********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.9E-18 | 163 | 225 | No hit | No description |
SMART | SM00338 | 4.0E-21 | 165 | 229 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.4E-21 | 166 | 227 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.599 | 167 | 230 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.31E-11 | 169 | 224 | No hit | No description |
CDD | cd14702 | 1.24E-19 | 170 | 218 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 172 | 187 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
MWAPQNMPTA AFGKPYAAIY PHAGGFVHPF MPLMVNPLNA EPAKSVNSKD ISLTKKLKEA 60 DGTAVSTGSG NSEKTSGDYS LEGSSDGNNQ KACGTPKKRS LDDMTTSGAE TCGASAPNDR 120 TKESGRLATL ANVRIQDTAI KPCVSTGSDF RVSGTPSTEW PAKDDKESKR ERRKQSNRES 180 ARRSRLRKQA ETEELARKVE LLTAENTSLR SEINKLTESS QKLRMENSAL MEKLTETGSA 240 PEEAQEEVPA DQTAAAPPPV RVVKNFLSMM DGAGAPRSSR HMDHGAPRLR QLLGSGPLAA 300 DAVAAS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 181 | 187 | RRSRLRK |
2 | 181 | 188 | RRSRLRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462922446 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004969366.1 | 1e-166 | G-box-binding factor 3 | ||||
Refseq | XP_022682183.1 | 1e-166 | G-box-binding factor 3 | ||||
TrEMBL | D2CP30 | 0.0 | D2CP30_ELECO; G-box binding factor 3 | ||||
STRING | Si001929m | 1e-166 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2776 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 1e-37 | G-box binding factor 3 |