PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462922446
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 306aa    MW: 32770.6 Da    PI: 9.1449
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462922446genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.99.3e-23165227163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L++e+++l++ ++kl++e+
  462922446 165 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRSEINKLTESSQKLRMEN 227
                689*********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.9E-18163225No hitNo description
SMARTSM003384.0E-21165229IPR004827Basic-leucine zipper domain
PfamPF001706.4E-21166227IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.599167230IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-11169224No hitNo description
CDDcd147021.24E-19170218No hitNo description
PROSITE patternPS000360172187IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MWAPQNMPTA AFGKPYAAIY PHAGGFVHPF MPLMVNPLNA EPAKSVNSKD ISLTKKLKEA  60
DGTAVSTGSG NSEKTSGDYS LEGSSDGNNQ KACGTPKKRS LDDMTTSGAE TCGASAPNDR  120
TKESGRLATL ANVRIQDTAI KPCVSTGSDF RVSGTPSTEW PAKDDKESKR ERRKQSNRES  180
ARRSRLRKQA ETEELARKVE LLTAENTSLR SEINKLTESS QKLRMENSAL MEKLTETGSA  240
PEEAQEEVPA DQTAAAPPPV RVVKNFLSMM DGAGAPRSSR HMDHGAPRLR QLLGSGPLAA  300
DAVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181187RRSRLRK
2181188RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap462922446
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969366.11e-166G-box-binding factor 3
RefseqXP_022682183.11e-166G-box-binding factor 3
TrEMBLD2CP300.0D2CP30_ELECO; G-box binding factor 3
STRINGSi001929m1e-166(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-37G-box binding factor 3