PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462884212
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 467aa    MW: 53008.3 Da    PI: 9.0125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462884212genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-19184233255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r+++ +g+W+AeIrdp++     r++lg++ t+e+Aaka++a ++k++g
  462884212 184 PYRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTYETPEDAAKAYDAEARKIRG 233
                59*******.**********954...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.894184241IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-21184243IPR016177DNA-binding domain
SMARTSM003805.5E-37184247IPR001471AP2/ERF domain
PRINTSPR003672.7E-10185196IPR001471AP2/ERF domain
PfamPF008472.6E-11185233IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-31185243IPR001471AP2/ERF domain
CDDcd000183.31E-30185242No hitNo description
PRINTSPR003672.7E-10207223IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MVSPASRIPC KSIVDMKRIK NHGEWGRRRL AKPYKERDDF EAEFQAFLKA CDEMDESHDE  60
FMALSPWEDD LKGVLEASKE KYTFTSAKNE NRGEWGQRRL MKPYNDGDNF EAKFQAFLMY  120
DKMDENHDEF MALQRWEDDL RGVLEGSKEK DTFTSATNDA INNHKATNGD EVTIVMPKRK  180
RMNPYRGIRR RPWGKWAAEI RDPRKGVRVW LGTYETPEDA AKAYDAEARK IRGKKAKVNF  240
PDETPPSSLL NNTPKQIAMA RPMMLLPTEE LNINQSLGFY GSNEDLFSVV NFNGNKSTFM  300
PSGSFNSLSM KKPHEISRMG VFPTQSGFPS RSLLPCAEML ISGRTVDGLS TMIERNEGAT  360
TAPALSNAMS NLPPVVHGVE AGARIDHPIL KEIATEYIPP ILQVKIHFMP RLIFEKGKPA  420
IHDEAAGIGR PARPRRWSSL IVTGQTPEQA HHMRKQRQES GQDGCKM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-19185241360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A4e-19185241663ATERF1
3gcc_A4e-19185241663ATERF1
5wx9_A8e-191852431574Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMap462884212
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A317Y6743e-74A0A317Y674_MAIZE; Ethylene-responsive transcription factor ERF071
STRINGPavir.Fa00811.1.p2e-75(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP168501012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.18e-31ethylene-responsive element binding protein