 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462862148 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WOX |
| Protein Properties |
Length: 430aa MW: 45825.6 Da PI: 9.162 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462862148 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 64.2 | 1.9e-20 | 6 | 66 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++t+eql +Lee++++ r+p+a+e+++++++l +++ ++V++WFqN++a+e++
462862148 6 STRWCPTPEQLMILEEMYRSgVRTPNAAEIQQITAHLayygRIEGKNVFYWFQNHKARERQ 66
58*****************99**************************************97 PP
|
| 2 | Wus_type_Homeobox | 119.9 | 1.1e-38 | 5 | 67 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
++tRW+PtpeQ++iLee+y+sG+rtPn++eiq+ita+L+ yG+ie+kNVfyWFQN+kaRerq+
462862148 5 PSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 67
689***********************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MPQTPSTRWC PTPEQLMILE EMYRSGVRTP NAAEIQQITA HLAYYGRIEG KNVFYWFQNH 60
KARERQRLRR RLCARHHHHH QPPPIPPPPA AGSSAAAVTV HPASYAAASF IQHPHLGGYM 120
GMGTLPVVQH PAAARGGGDK MATAPTGGAA FYSSGNNNNN NCSQQDWTTM SMEPNCTASP 180
GSSDDGFPLP PCCRRPLKTL DLFPTKSSTG GLRDECSSSK SSSFHEYGGY LGSLPVVQHP 240
AAAAAAGGGG NKMATAPAGG PALYSSGNNN NSSQGDWTTM SMEPNCTASP GSSDDGFPLP 300
PCCRRPLKTL DLFPTKSSTG GLRDECSSSK SSSGQRSSLG SSVCFSFPFA KFVGTPLSEN 360
DFIRFSRGRV AKSPIDYLLG ILISRLRGVE QVGSSTCRRP EIIGELIRNI IGVSPAIFSI 420
KYLSSSAAKT
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor required to initiate organ founder cells in a lateral domain of shoot meristems. Involved in leaf formation. {ECO:0000269|PubMed:15169755}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AJ536578 | 4e-89 | AJ536578.1 Zea mays mRNA for homeodomain transcription factor (prs gene). |
| GenBank | BT066120 | 4e-89 | BT066120.1 Zea mays full-length cDNA clone ZM_BFb0350F05 mRNA, complete cds. |
| GenBank | EU969087 | 4e-89 | EU969087.1 Zea mays clone 325979 WUSCHEL-related homeobox 3B mRNA, complete cds. |
| GenBank | JX469942 | 4e-89 | JX469942.1 Zea mays subsp. mays clone UT3202 HB-type transcription factor mRNA, partial cds. |
