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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
405321 |
Common Name | SELMODRAFT_405321 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
B3 |
Protein Properties |
Length: 539aa MW: 60266.5 Da PI: 9.5022 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
405321 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 43.6 | 5.4e-14 | 230 | 314 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
+++ v s+ l++p++ a + ++kk +++t+ l+de+g++W + + + ++ +GW++ ++++ Lk g++++F+++g +++l++k+f
405321 230 VIHKPVRFSH-LSVPRRLA-KDQLKKLCNTTVFLQDERGQEWPIGT--NEHA---YFCSGWNRLARDKSLKGGEVILFMHEG--RGRLRFKIFA 314
5566777777.9******9.6678999*******************..5554...7888********************766..6667999985 PP
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2 | B3 | 34.2 | 4.6e-11 | 463 | 537 | 16 | 97 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
l++ ++fae++ ++++ t ++ d ++ W+vk + +++vl++GW eF++ + Lk D+++F+l+ ++ f v+++
405321 463 LSVRREFAERYL--PRKPATTSVVDGDSTLWTVKW--LGI-RACVLGAGWPEFARHHVLKKLDICLFELITQRAF--QVRIY 537
78999******5..45778999*************..555.479*************************987777..66665 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MKPPRAILLV AVLGAIAHLI RGNEVVKFAR TLEGSGSHRE LKTDISLQLD DKFQGDSCRL 60 SLVENLPSSV FADTFQLQRL TRMGRYEAAH VSGDLDLERP AFFSGPVTVR IQVSLDQNAN 120 VFHAETSLPL HARYAPLGID SYHLINLSSP SVAVSCKKNA EELQLELAAS EEVQWPIPAG 180 NPDDASTVNR FTALAAAAGT LVLCSISVMK KRVVILEMAD EREKVWFVRV IHKPVRFSHL 240 SVPRRLAKDQ LKKLCNTTVF LQDERGQEWP IGTNEHAYFC SGWNRLARDK SLKGGEVILF 300 MHEGRGRLRF KIFAADGADR QDFGTERFCG RPPRIGGSKH RKIVRKPRIV KKPAPKLAVP 360 VCVQAVVKEE VEESGMLGDA EPAVVAMAEE QSPDDHEPAV EPSPELPHHR ESSPPFLERN 420 LRSRPPLVRS KLHLHRLAMD AALAYKSDKP TFIVKIQGDE TVLSVRREFA ERYLPRKPAT 480 TSVVDGDSTL WTVKWLGIRA CVLGAGWPEF ARHHVLKKLD ICLFELITQR AFQVRIYR*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 338 | 347 | KHRKIVRKPR |