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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
403257 |
| Common Name | SELMODRAFT_403257 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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| Family |
ERF |
| Protein Properties |
Length: 146aa MW: 15978.3 Da PI: 11.2476 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 403257 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 40.9 | 5.2e-13 | 22 | 71 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y GV++++ +g + AeIr p kr +lg++ t++ Aa a++ a++ ++g
403257 22 SRYIGVCRRP-WGTYGAEIRTP-----AgKRLWLGTYLTEDAAAHAYDDAARTFRG 71
78********.**********9.....55**********99***********9998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MSLSCGSHKA KSWSLDTRPQ KSRYIGVCRR PWGTYGAEIR TPAGKRLWLG TYLTEDAAAH 60
AYDDAARTFR GKNAATNFTH KPSAKITKTH KLGRRLKAGS GTAQHRKSDE DRGIEGLLAL 120
SGTMEVKTGS GRKKRKFKNL KAGVF*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Regulates gene expression patterns in meristems and thus modulates organ development. Required for correct embryo patterning and cotyledon organogenesis. Modulates auxin signaling pathway in early embryos. Involved in the cytokinin signaling pathway that promotes shoot regeneration. Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:11752375, ECO:0000269|PubMed:12615942, ECO:0000269|PubMed:17376809}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cytokinins. {ECO:0000269|PubMed:11752375}. |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP6 | 16 | 1718 |
| Publications
? help Back to Top |
- Banks JA, et al.
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Science, 2011. 332(6032): p. 960-3
[PMID:21551031] - Seeliger I, et al.
The AP2-type transcription factors DORNRÖSCHEN and DORNRÖSCHEN-LIKE promote G1/S transition.
Mol. Genet. Genomics, 2016. 291(5): p. 1835-49
[PMID:27277595] - Iwase A, et al.
WIND1 Promotes Shoot Regeneration through Transcriptional Activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis.
Plant Cell, 2017. 29(1): p. 54-69
[PMID:28011694] - Capua Y,Eshed Y
Coordination of auxin-triggered leaf initiation by tomato LEAFLESS.
Proc. Natl. Acad. Sci. U.S.A., 2017. 114(12): p. 3246-3251
[PMID:28270611] - Chandler JW,Werr W
DORNRÖSCHEN, DORNRÖSCHEN-LIKE, and PUCHI redundantly control floral meristem identity and organ initiation in Arabidopsis.
J. Exp. Bot., 2017. 68(13): p. 3457-3472
[PMID:28859377] - Luo L,Zeng J,Wu H,Tian Z,Zhao Z
A Molecular Framework for Auxin-Controlled Homeostasis of Shoot Stem Cells in Arabidopsis.
Mol Plant, 2018. 11(7): p. 899-913
[PMID:29730265]
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