PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3852
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Subtree rooted at node 97: /----- Ciclev10002059m [Citrus clementina] (2) /-100+ | \----- orange1.1g025985m [Citrus sinensis] (18) /----100---+ | \---------- Neem_10904_f_1 [Azadirachta indica] (9) | | /--------------- Thecc1EG035623t1 [Theobroma cacao] (14) | | | | /---------- Gh_A02G0658 [Gossypium hirsutum] (17) |-100-+ | | | | /----- Gorai.005G078500.1 [Gossypium raimondii] (49) | | |-100+ /-100+ \-100+ \----- Gh_D02G0701 [Gossypium hirsutum] (54) | | | | | |---------- Gh_Sca062674G01 [Gossypium hirsutum] (50) | | | | | \---------- Cotton_A_10385_BGI-A2_v1.0 [Gossypium arboreum] (51) | | | |--------------------- evm.model.supercontig_21.207 [Carica papaya] (16) /--------100--------+ | | | | /----- EcC007349.20 [Eucalyptus camaldulensis] (19) | | \-------91------+ | | \----- Eucgr.G00615.1.p [Eucalyptus grandis] (21) | | | | /----- XP_010533398.1 [Tarenaya hassleriana] (29) | \---------100--------+ | \----- XP_010535311.1 [Tarenaya hassleriana] (40) | | /--------------------- 676784136 [Sisymbrium irio] (3) | | | | /----- Rsa1.0_04071.1_g00002.1 [Raphanus sativus] (8) | /-100+ /---100---+ | | | | \----- RrC7838_p2 [Raphanus raphanistrum] (25) | | | | | | \-100-+ /----- XP_009101738.1 [Brassica rapa] (11) | | | /-100+ | | | | \----- GSBRNA2T00018780001 [Brassica napus] (32) | /-93-+ \-100+ | | | | /----- XP_013598131.1 [Brassica oleracea] (23) | | | \-100+ /-100-+ | | \----- GSBRNA2T00014148001 [Brassica napus] (55) | | /-100+ | | | | | \-------------------------- Tp2g08910 [Thellungiella parvula] (42) | | | | | | | \------------------------------- Thhalv10003246m [Eutrema salsugineum] (41) | | | | | | /----- Carubv10027647m [Capsella rubella] (4) | | | /------100------+ | | | | \----- Cagra.12696s0002.1.p [Capsella grandiflora] (52) | | | | | | | | /----- Csa11g070630.1 [Camelina sativa] (6) | | | /-100+ /-100+ | | /-70-+ | | | \----- Csa18g009710.1 [Camelina sativa] (39) | | | | | | /-54-+ | | | | | | | \---------- Csa20g070120.1 [Camelina sativa] (48) /-100+ | | | | \-100-+ | | | | | | \--------------- Csa08520s010.1 [Camelina sativa] (47) | | | | | /-100+ | | | | | | |-------------------------- Bostr.3148s0051.1.p [Boechera stricta] (10) | | | | | | | | | \-100+ | | | /----- 494588 [Arabidopsis lyrata] (15) | | | | | | /-99-+ | | | \-75-+ | | \----- Araha.15626s0002.1.p [Arabidopsis halleri] (24) | | | | \------100------+ | | | | \---------- AT5G44080.1 [Arabidopsis thaliana] (20) | | | | | | | \------------------------------- KFK31667.1 [Arabis alpina] (7) | | | | | \----------------------------------------- AA32G00382 [Aethionema arabicum] (12) | | /-100+ \---------------------------------------------------- AA19G00150 [Aethionema arabicum] (45) | | | | /--------------------- 676747662 [Sisymbrium irio] (5) | | | | | | /----- GSBRNA2T00150315001 [Brassica napus] (13) | | | /-97-+ | | /-100+ | \----- XP_009119346.1 [Brassica rapa] (53) | | | | /-100+ | | | | | | /----- XP_013638560.1 [Brassica oleracea] (26) | | | | | \-100+ | | | \-100-+ \----- GSBRNA2T00002726001 [Brassica napus] (31) | | /-100+ | | | | | | /----- Rsa1.0_00556.1_g00033.1 [Raphanus sativus] (22) --85-+ | | | \---100---+ | | | | \----- RrC110_p8 [Raphanus raphanistrum] (34) | \------------88-----------+ | | | \-------------------------- Thhalv10009710m [Eutrema salsugineum] (44) | | | \------------------------------- KFK42741.1 [Arabis alpina] (38) | | /----- 470374 [Arabidopsis lyrata] (27) | /-81-+ | | \----- 892661 [Arabidopsis lyrata] (33) | /-61-+ | | \---------- AT1G03970.1 [Arabidopsis thaliana] (30) \----------------------88----------------------+ \--------------- Araha.6022s0006.1.p [Arabidopsis halleri] (43) Root part of tree: /------------------------------------------------------------------- Cagra.1671s0014.1.p [Capsella grandiflora] (1) | |------------------------------------------------------------------- Carubv10011573m [Capsella rubella] (28) | + /------------------------------------------------------ (97) | | | | /---------------------------------------- Bostr.26675s0358.1.p [Boechera stricta] (35) \-----100----+ | | | /------------- Csa14g005080.1 [Camelina sativa] (36) \------61-----+ /------99-----+ | | \------------- Csa03g005160.1 [Camelina sativa] (46) \-----97-----+ \--------------------------- Csa17g007050.1 [Camelina sativa] (37) |