PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3137
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Subtree rooted at node 93: /----- Gorai.007G226500.1 [Gossypium raimondii] (2) /-92-+ | \----- Gh_D11G2055 [Gossypium hirsutum] (18) /-100+ | | /----- Gh_A11G1920 [Gossypium hirsutum] (23) | \-100+ | \----- Cotton_A_31319_BGI-A2_v1.0 [Gossypium arboreum] (26) /-100-+ | | /----- Gh_D12G0743 [Gossypium hirsutum] (25) | | /-100+ | | | \----- Gorai.008G086000.1 [Gossypium raimondii] (40) | \-100+ /-100+ | /----- Gh_A12G0721 [Gossypium hirsutum] (50) | | \-99-+ | | \----- Cotton_A_32578_BGI-A2_v1.0 [Gossypium arboreum] (54) | | /-68-+ \--------------------- Thecc1EG000844t1 [Theobroma cacao] (45) | | | | /---------- Neem_8505_f_4 [Azadirachta indica] (17) | | | /------55------+ \------100------+ /----- Ciclev10025111m [Citrus clementina] (55) | | \-100+ | | \----- orange1.1g005737m [Citrus sinensis] (58) | | | \------------------------------- evm.model.supercontig_129.70 [Carica papaya] (21) | | /----- Gh_A06G0222 [Gossypium hirsutum] (7) | /-100+ | | \----- Cotton_A_25257_BGI-A2_v1.0 [Gossypium arboreum] (47) | /-100+ | | \---------- Gh_D06G0216 [Gossypium hirsutum] (13) | /-100-+ | | \--------------- Gorai.010G028100.1 [Gossypium raimondii] (31) | /-100+ | | \--------------------- Thecc1EG034652t1 [Theobroma cacao] (56) | /-90-+ | | \-------------------------- Neem_1536_f_4 [Azadirachta indica] (39) /--76-+ /-100+ | | | \------------------------------- evm.model.supercontig_160.33 [Carica papaya] (35) | | | | | /-68-+ /----- XP_010556486.1 [Tarenaya hassleriana] (19) | | | | /-100+ | | | | | \----- XP_010520794.1 [Tarenaya hassleriana] (53) | | | \------------73-----------+ | | | | /----- Eucgr.F00098.1.p [Eucalyptus grandis] (41) | | | \-100+ | |-96-+ \----- EcC031797.20 [Eucalyptus camaldulensis] (49) /-100+ | | | | | | /----- EcC045126.10 [Eucalyptus camaldulensis] (10) | | | | /-100+ | | | | | \----- EcC033411.10 [Eucalyptus camaldulensis] (16) | | | \--------------100-------------+ | | | \---------- Eucgr.F02223.1.p [Eucalyptus grandis] (42) | | | /-100+ | \---------------------------------------------- Eucgr.H02335.1.p [Eucalyptus grandis] (27) | | | | | \---------------------------------------------------- Thecc1EG025083t1 [Theobroma cacao] (36) | | | | /---------- XP_010523284.1 [Tarenaya hassleriana] (6) --100+ | | | \----------------------100---------------------+ /----- XP_010526697.1 [Tarenaya hassleriana] (20) | \-74-+ | \----- XP_010531314.1 [Tarenaya hassleriana] (38) | \-------------------------------------------------------------- AA30G00284 [Aethionema arabicum] (37) Root part of tree: /------------------------------------------------------------------- RrC2664_p1 [Raphanus raphanistrum] (1) | |------------------------------------------------------------------- Rsa1.0_03453.1_g00001.1 [Raphanus sativus] (24) | | /------- (93) | /---------------96---------------+ | | \------- KFK30385.1 [Arabis alpina] (4) | | | | /------- Cagra.4290s0005.1.p [Capsella grandiflora] (3) | | /--------100--------+ | | | \------- Carubv10004485m [Capsella rubella] (44) | | | | /--89--+ | /------- Csa11g003790.1 [Camelina sativa] (8) | | | /-100-+ /-100-+ | | | | | | \------- Csa10g003350.1 [Camelina sativa] (30) | | | | | /--100-+ | | | | | | \------------- Csa12g003630.1 [Camelina sativa] (61) | | | | \--100-+ | | \--92--+ \-------------------- Bostr.7867s1636.1.p [Boechera stricta] (57) | /--88--+ | | | | | /------- 912555 [Arabidopsis lyrata] (14) | | | | /--72-+ | | | | | \------- Araha.10681s0002.1.p [Arabidopsis halleri] (43) | | | \--------100--------+ + | | \------------- AT4G37750.1 [Arabidopsis thaliana] (52) | | | | | \----------------------------------------------- Thhalv10024807m [Eutrema salsugineum] (32) | | | |------------------------------------------------------ Tp7g35400 [Thellungiella parvula] (9) | | | | /------- GSBRNA2T00079433001 [Brassica napus] (11) | | /-100-+ | | | \------- XP_009109389.1 [Brassica rapa] (46) | | /--100-+ | | | | /------- XP_013622555.1 [Brassica oleracea] (59) | /-100-+ | \-100-+ | | |----------------87---------------+ \------- GSBRNA2T00096252001 [Brassica napus] (63) | | | | | | | | /------- Rsa1.0_00792.1_g00008.1 [Raphanus sativus] (15) | | | \-----86-----+ | | | \------- RrC4351_p1 [Raphanus raphanistrum] (22) | | | | | | /------- RrC2266_p3 [Raphanus raphanistrum] (12) | | | /-----100----+ | | | | \------- Rsa1.0_00461.1_g00002.1 [Raphanus sativus] (62) | | | | | | | /--100-+ /------- GSBRNA2T00131160001 [Brassica napus] (28) \--100-+ | | | /-100-+ | | | | | \------- XP_013618705.1 [Brassica oleracea] (29) | | | \--100-+ | \------------97------------+ | /------- GSBRNA2T00121601001 [Brassica napus] (51) | | \-100-+ | | \------- XP_009133593.1 [Brassica rapa] (60) | | | \--------------------------- 676745240 [Sisymbrium irio] (33) | | /------- GSBRNA2T00100217001 [Brassica napus] (5) | /-100-+ | | \------- XP_013593440.1 [Brassica oleracea] (48) \----------------------100---------------------+ \------------- XP_009138530.1 [Brassica rapa] (34) |