PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2403
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Subtree rooted at node 118: /----- XP_009135499.1 [Brassica rapa] (2) /-100+ | \----- GSBRNA2T00137511001 [Brassica napus] (46) /-100+ | | /----- GSBRNA2T00123894001 [Brassica napus] (57) | \-100+ /------100------+ \----- XP_013630076.1 [Brassica oleracea] (63) | | | | /----- RrC1635_p1 [Raphanus raphanistrum] (60) | \---100---+ | \----- Rsa1.0_04557.1_g00001.1 [Raphanus sativus] (68) /-67-+ | | /-------------------------- 676773284 [Sisymbrium irio] (15) | | | | | | /--------------- XP_009146051.1 [Brassica rapa] (36) | | | | | \-93-+ /-100-+ /---------- GSBRNA2T00153791001 [Brassica napus] (45) | | | | | | | | \-52-+ /----- XP_013586644.1 [Brassica oleracea] (53) /-88-+ | | \-100+ | | \-100+ \----- GSBRNA2T00101896001 [Brassica napus] (59) | | | | | | /----- RrC30637_p1 [Raphanus raphanistrum] (43) | | \------100------+ /-100+ | \----- Rsa1.0_03188.1_g00004.1 [Raphanus sativus] (55) | | | | | \------------------------------------ Tp3g15100 [Thellungiella parvula] (23) | | | \----------------------------------------- Thhalv10020213m [Eutrema salsugineum] (31) | | /----- Carubv10013107m [Capsella rubella] (9) | /---100---+ /--54-+ | \----- Cagra.5497s0018.1.p [Capsella grandiflora] (61) | | | | | /--96-+ /----- Csa19g023750.1 [Camelina sativa] (20) | | | | /-83-+ | | | | | \----- Csa01g019530.1 [Camelina sativa] (32) | | | \-100+ | | | \---------- Csa15g021770.1 [Camelina sativa] (39) | | | /-100+ \-----------100----------+ /----- 479152 [Arabidopsis lyrata] (12) | | | /-100+ | | | | \----- Araha.21982s0001.1.p [Arabidopsis halleri] (33) | | | /-94-+ | | | | \---------- AT3G16857.2 [Arabidopsis thaliana] (41) /-100+ | \--55-+ | | | \--------------- Bostr.28625s0008.1.p [Boechera stricta] (62) | | | | | \---------------------------------------------------- KFK39028.1 [Arabis alpina] (13) | | | \--------------------------------------------------------- AA26G00379 [Aethionema arabicum] (14) | | /---------- Gh_A09G2069 [Gossypium hirsutum] (4) | | | /------100------+ /----- Gh_D09G2278 [Gossypium hirsutum] (28) | | \-100+ | | \----- Gorai.006G259700.1 [Gossypium raimondii] (54) | | | | /----- Gorai.002G029200.1 [Gossypium raimondii] (7) | | /-74-+ | | | \----- Gh_Sca005214G03 [Gossypium hirsutum] (26) | /-100+ /-60-+ | | | | | /----- Cotton_A_17803_BGI-A2_v1.0 [Gossypium arboreum] (29) | | | | \-100+ | | | /-100-+ \----- Gh_A01G0217 [Gossypium hirsutum] (42) | | | | | | | | | \--------------- Gorai.007G240900.1 [Gossypium raimondii] (19) --100+ | | | | | \-100+ /----- Gorai.011G196400.1 [Gossypium raimondii] (11) | /-100+ | /-100+ | | | | | \----- Gh_D10G1750 [Gossypium hirsutum] (40) | | | \----100---+ | | | | /----- Gh_A10G1504 [Gossypium hirsutum] (27) | | | \-100+ | | | \----- Cotton_A_19860_BGI-A2_v1.0 [Gossypium arboreum] (64) | | | | | \------------------------------- Thecc1EG021300t1 [Theobroma cacao] (18) | /-99-+ | | | /----- Neem_30614_f_1 [Azadirachta indica] (8) | | | /---100---+ | | | | \----- Neem_495_f_2 [Azadirachta indica] (17) | | | | | | | /-100-+ /----- orange1.1g027234m [Citrus sinensis] (47) | | | | | /-84-+ | /-100+ | | | | \----- Ciclev10004989m [Citrus clementina] (72) | | | \------99------+ \-100+ | | | | \---------- Ciclev10004470m [Citrus clementina] (71) | | | | \------100------+ | \--------------------- Eucgr.A00189.1.p [Eucalyptus grandis] (10) | | | \----------------------------------------- evm.model.supercontig_9.105 [Carica papaya] (24) | \---------------------------------------------- XP_010548968.1 [Tarenaya hassleriana] (16) Root part of tree: /------------------------------------------------------------------- Csa10g029760.1 [Camelina sativa] (1) | | /------------ (118) | | | /----100----+ /------ AA18G00178 [Aethionema arabicum] (44) | | \-100-+ | | \------ AA18G00181 [Aethionema arabicum] (56) | | | | /------ XP_009136740.1 [Brassica rapa] (5) | /-----------59-----------+ /-100-+ | | | | \------ GSBRNA2T00151176001 [Brassica napus] (50) | | | /-100-+ | | | | | /------ GSBRNA2T00031391001 [Brassica napus] (30) | | | | \-100-+ | | \-100-+ \------ XP_013598455.1 [Brassica oleracea] (69) | | | | | \------------------ Rsa1.0_04220.1_g00001.1 [Raphanus sativus] (38) | | | | /------ Rsa1.0_00077.1_g00002.1 [Raphanus sativus] (3) | | /----100----+ | | | \------ RrC1971_p1 [Raphanus raphanistrum] (35) | | | | /-100-+ /-100-+ /------ GSBRNA2T00056495001 [Brassica napus] (6) | | | | | /-100-+ | | | | | | \------ XP_013601580.1 [Brassica oleracea] (34) | | | | \-100-+ + | | /--61-+ | /------ XP_009146503.1 [Brassica rapa] (22) | | | | | \-100-+ | | | | | \------ GSBRNA2T00051639001 [Brassica napus] (48) | | | /--61--+ | | | | | | \------------------------ 676739220 [Sisymbrium irio] (21) | | | | | | /--94-+ | /--59-+ \------------------------------ Tp7g14570 [Thellungiella parvula] (49) | | | | | | | | | \--59-+ \------------------------------------- Thhalv10024686m [Eutrema salsugineum] (58) | | | | | | | \------------------------------------------- KFK27554.1 [Arabis alpina] (73) | | | | | | /------ Araha.3152s0007.1.p [Arabidopsis halleri] (66) |-100-+ | /-100-+ | | | | \------ 915160 [Arabidopsis lyrata] (70) | | \--------------------100-------------------+ | | \------------ AT4G16110.1 [Arabidopsis thaliana] (67) | | | | /------------ Bostr.30275s0051.1.p [Boechera stricta] (37) | | | | \-----------------------73-----------------------+ /------ Carubv10007581m [Capsella rubella] (51) | \-100-+ | \------ Cagra.0053s0018.1.p [Capsella grandiflora] (65) | | /------ Csa12g053330.1 [Camelina sativa] (25) \-----------------------------96-----------------------------+ \------ Csa11g034020.1 [Camelina sativa] (52) |