PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH11630.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

G2-like

Protein Properties

Length: 456aa MW: 46973.4 Da PI: 7.602

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH11630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.5	2.2e-26	337	390	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH++F +av +L G ekA+Pk+i++ m+++gLt+e+v+SHLQkYR+ PNH11630.1 337 RPRLVWTPQLHKKFESAVLKL-GDEKAVPKNIMQEMNIDGLTRENVASHLQKYRM 390 59*****************.9*****************************8 PP
2	Myb_DNA-binding	42.5	1.5e-13	339	389	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++ av +lG + +k I+++m+ g+t++++ s++qky+ PNH11630.1 339 RLVWTPQLHKKFESAVLKLGDEkaVPKNIMQEMNiDGLTRENVASHLQKYR 389 789***************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MAYDVVQALQ GIYGMKDDYG LDPSAGLVPL GTSLLPPIVA QAFGLPSLGS LAPPPQPPPQ 60 QQYQALYGSM VNPALLGALG AFGGASQYQS QPHYGGLAST SALGYLQALA AAGQHQQQQQ 120 QQQQSAVALL AHTAALAAAA RSAPASSSAF SQPMQPPTAA DYCSHPAYSS ARAVACELER 180 AATASATTSG PSGMKGPTFS NSAGSAPYQH PLMQNLYTAA LAQQQQQSAY GVGQGMSPYA 240 SHFPGYYARP DTSAAVAAAA VAAAAGAYGY GQAPSVSYGA YHPSYSSGPA LDYSALAAAY 300 RPAMSAPAAP TASINPQSQS ICDDEYADDG SARAIKRPRL VWTPQLHKKF ESAVLKLGDE 360 KAVPKNIMQE MNIDGLTREN VASHLQKYRM SRKHGRDGSS IDCRDSDTVT IGSKREPEPI 420 RPTPILAQPP GAAKAACGAG ASSEQIANGG SLGARD

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MAYDVVQALQ GIYGMKDDYG LDPSAGLVPL GTSLLPPIVA QAFGLPSLGS LAPPPQPPPQ  60
QQYQALYGSM VNPALLGALG AFGGASQYQS QPHYGGLAST SALGYLQALA AAGQHQQQQQ  120
QQQQSAVALL AHTAALAAAA RSAPASSSAF SQPMQPPTAA DYCSHPAYSS ARAVACELER  180
AATASATTSG PSGMKGPTFS NSAGSAPYQH PLMQNLYTAA LAQQQQQSAY GVGQGMSPYA  240
SHFPGYYARP DTSAAVAAAA VAAAAGAYGY GQAPSVSYGA YHPSYSSGPA LDYSALAAAY  300
RPAMSAPAAP TASINPQSQS ICDDEYADDG SARAIKRPRL VWTPQLHKKF ESAVLKLGDE  360
KAVPKNIMQE MNIDGLTREN VASHLQKYRM SRKHGRDGSS IDCRDSDTVT IGSKREPEPI  420
RPTPILAQPP GAAKAACGAG ASSEQIANGG SLGARD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05090.1	4e-25	G2-like family protein