PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH11470.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

Nin-like

Protein Properties

Length: 603aa MW: 62058.5 Da PI: 8.1757

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH11470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	63.4	3.8e-20	455	503	2	50
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +++i+ + l+++F+ pik+AA++Lg +l+ LK+ CR++G++RWP Rk++ PNH11470.1 455 QAHITRSALKQHFHRPIKQAARHLGASLSCLKKVCRRLGVPRWPCRKLA 503 689********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MVAACTPLHR YPPPPGSLAA AAAATDVMHD IFGGPGLAFD VDMRYMSAPS PASMPPRCFD 60 DAIAAASKLT AAASAASVAA ATGPSNIVPP SAGAAAKVAG RSSSSNQRMA NLSSVEPMAL 120 GGVELSAWGP VPAAPATTPG AARGLPSGAA DSCSALSSDD CSGWSPFIEA LCCTKMEEDG 180 LGRQAPGAAT SPMQLLAYDG AWERNPNDQR LALSEPERAW GFSGSTVAAC ISGCHDELSS 240 APRGAFAGPS APRAVPSQPT APRLGNGRDS RLGSFAGGGS NVLGPVWANR TWSDRQPPAM 300 HSAGLPSVTN VSFAGREARA AFIKAERGSG LIKVEPVSYG LTGFHRASDP TGIKLDSAWP 360 VDAADQMGET DAAPGVQASR RLSVRPSGRA LARPSRHAGS SNTLADADAG SAKLLLLVMD 420 GPEGGRENGG AADGGDCEDA EGGLERAGRK QRVAQAHITR SALKQHFHRP IKQAARHLGA 480 SLSCLKKVCR RLGVPRWPCR KLACLCKMRD TLQAEAAGGA GDKQVLLALV LRNIEEIYDN 540 PDAPMYDCFA RLRQNQYKNR HRSSGTVAGG PPAAAGRAGR RRQAEGGDSD TSESDDSVGS 600 GYD

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MVAACTPLHR YPPPPGSLAA AAAATDVMHD IFGGPGLAFD VDMRYMSAPS PASMPPRCFD  60
DAIAAASKLT AAASAASVAA ATGPSNIVPP SAGAAAKVAG RSSSSNQRMA NLSSVEPMAL  120
GGVELSAWGP VPAAPATTPG AARGLPSGAA DSCSALSSDD CSGWSPFIEA LCCTKMEEDG  180
LGRQAPGAAT SPMQLLAYDG AWERNPNDQR LALSEPERAW GFSGSTVAAC ISGCHDELSS  240
APRGAFAGPS APRAVPSQPT APRLGNGRDS RLGSFAGGGS NVLGPVWANR TWSDRQPPAM  300
HSAGLPSVTN VSFAGREARA AFIKAERGSG LIKVEPVSYG LTGFHRASDP TGIKLDSAWP  360
VDAADQMGET DAAPGVQASR RLSVRPSGRA LARPSRHAGS SNTLADADAG SAKLLLLVMD  420
GPEGGRENGG AADGGDCEDA EGGLERAGRK QRVAQAHITR SALKQHFHRP IKQAARHLGA  480
SLSCLKKVCR RLGVPRWPCR KLACLCKMRD TLQAEAAGGA GDKQVLLALV LRNIEEIYDN  540
PDAPMYDCFA RLRQNQYKNR HRSSGTVAGG PPAAAGRAGR RRQAEGGDSD TSESDDSVGS  600
GYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	6e-14	Nin-like family protein