PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH11066.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

CPP

Protein Properties

Length: 2016aa MW: 205071 Da PI: 8.2866

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH11066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.3	1.5e-13	714	751	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 k+C+Ck+s+Clk+YC+Cfaag++C+ C+C +C+N+ e PNH11066.1 714 AKSCRCKRSQCLKLYCDCFAAGQYCGA-CSCASCHNRPE 751 799*********************9.******876 PP
2	TCR	47.1	4.9e-15	784	822	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k+k+gCnCk+s+ClkkYCeC++ g+kC+ +CkC +C+N PNH11066.1 784 KHKRGCNCKRSHCLKKYCECYQGGVKCGMQCKCLECENM 822 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 2016 aa Download sequence
MLGQAGQGGC ASAFPPNEPG ALEAGKAPFR RGQRAKAAAA VPGADMGTDY AVGSPWFTRD 60 DSFRAQLGSP LPPLQSPPPL FHASPRRNAL VSPTRHASKA ITGRNSDYFD SFFSPGGGSM 120 LLSPSAFGCS GLMDTPSSRA LPLPDFLTPT PCKGNLNELL RLFPADAPHD MQHKQHLQPH 180 GEQAHQQQQQ QQQQQQQQQQ QQHQQHHHQQ QQEQQREEQQ HHQQHQHHQQ QRLEDAGRCP 240 QPAGVHAFGA SGPGGRAAAT WGAGTQAPSH APAITHSAHP DGGGRSHFEL RGAAGDEELR 300 TLGSPPFELG DIGLASNHGP RGLGQSRSFM EGHGHGGGHG GGGVGGRGAL QLTVADMLLT 360 GGDADSPHAQ LPLPLPQPQP AAPGSGPQER PRSRVLDFAN PPQQGHSGDS GGGPPPPLPP 420 PRASLGAMPA LPMLPGLTVM GRINTGAMGA PPPKQQQQQP QQQQQQQQQQ RLQFNPQGDA 480 GGRGALAAPQ TPLLDLPYPS GPSGYPPALH GIMLPPGLGA LLSNDLGAAQ GGPGGEGAPP 540 ASRQAAAAAM LPPPLPLDVP PLPGVEGRRG GAGRAGRQGQ AEGDDAAAGA CGTAGQYGVK 600 PEPWDEGGLP LGVVAGRALL PPRSGGPAAT GAGGTPSTLQ RPQRNRTANS LLYGAPGAGY 660 ERPSARRVSS ADAAEVAAAA QPALSDLPSA MHRTSSGGAP AASNRSRRSS DSNAKSCRCK 720 RSQCLKLYCD CFAAGQYCGA CSCASCHNRP EYADRVLTRR EEIAARDPQA FSRKIMDAPG 780 GIAKHKRGCN CKRSHCLKKY CECYQGGVKC GMQCKCLECE NMDVVETAPA GRARGGARAK 840 AGGRAGGAAA RRSSASGAAE AQLSPPEGSG DEEEEDDEPP ARRPMTMRMS LPPMGLLSPP 900 SVSAPHGEGG GEPPLSADVS PASGGGDGGW DGGPGTLPLP LPLSLPLPLP FPSAAATAVS 960 KPAGGPRPLR AGITHFGGGF SGGGASPSDS VPEPQQQRQQ QQQARPPLPL PAPGRPQRKR 1020 TAPAWRGRSF ASDSDGSEAE EGGRGDEEDE GLEQGSRRGA KGGEQRRQQQ QQQQIQQQQQ 1080 QQQRQQQQEL EEQLQQQQRQ QQQNLQQQHH HHHQQQQQQQ QQQWQRTGGS DQRDQSEGDA 1140 SAADVAGPSA TRRLSVAEAE ALLSTPRPGT VEEADAAAAV ADAALAACPG FAPPPPSLPQ 1200 PPASRQAQPR ATLGPSSQHP GPIGGSLAPA VPSAAPPAML GGAGRAAVPT PDGGNEGGQN 1260 GGCGGTAMAA ATAAATEVVA ATRDGGDSGR RVDEYDTPAA AQHGQQREPP APPHGIGGGG 1320 GGLTSHRVSG GGSGLTPRRV SGGGGGDELM SPGALMGGVG LDFGGVDAAM ADEMIAAIAG 1380 AASMQHGGGG GGGDGGGAGA ARPGGGGLGG EGEALECRED LLGLGLGLGG LGMGMGLGMG 1440 MGLGVHDMED GDAADGADAF LFAPSQPNSV EGMRGVLGLG LGLGCTPPHP HGHNRHQQHG 1500 GGLFQPLSPI SMQLQRTGAA AAAATAAAAR RSRLLAERAA APPAQALLQQ QFSPSRRPSR 1560 FAPPGSGLSP YAPNLPQLGS FHRAGGSAPH HPHHPHHPHH AQFYDGGGGA RQAAPPDLGG 1620 VHTLVTPVRT SSGMGPHMAL LGGVGGVGGG VGGGVGGGGA RLSDTGKRKS YEAEAGGSQH 1680 PEHDGHRENW MLGPSSPAKL QRLHGGGHAP LQPLQLLGSG SHAAYANGPG SQQQHHQMQQ 1740 QQQHMQHQQH MQQQQHMQQH MQHMQHHHHM QQQQHAQQQM YPQQNHQQQQ NQHRAAPLLP 1800 PPEADGGGGR RAPPPAAARG GAPAAAAAGT GGRRVSAGAA KARNAAAEKE RLKASALLYM 1860 AQRVGGGGRP QPPGAGTAAA AGAPGGGGST LPAPDPGSFA GLQAPAQQQP QDQARQAEAA 1920 GRAGPLPAPL GPPANARSAA SGAPAQQQQQ QQADAALSTP GARGGGGGGG GCPGSGGSVT 1980 VVGGGMMTVA GQHVRLASMT KLASGSTLFR IGPKSG

Sequence ? help Back to Top

Protein Sequence Length: 2016 aa Download sequence

MLGQAGQGGC ASAFPPNEPG ALEAGKAPFR RGQRAKAAAA VPGADMGTDY AVGSPWFTRD  60
DSFRAQLGSP LPPLQSPPPL FHASPRRNAL VSPTRHASKA ITGRNSDYFD SFFSPGGGSM  120
LLSPSAFGCS GLMDTPSSRA LPLPDFLTPT PCKGNLNELL RLFPADAPHD MQHKQHLQPH  180
GEQAHQQQQQ QQQQQQQQQQ QQHQQHHHQQ QQEQQREEQQ HHQQHQHHQQ QRLEDAGRCP  240
QPAGVHAFGA SGPGGRAAAT WGAGTQAPSH APAITHSAHP DGGGRSHFEL RGAAGDEELR  300
TLGSPPFELG DIGLASNHGP RGLGQSRSFM EGHGHGGGHG GGGVGGRGAL QLTVADMLLT  360
GGDADSPHAQ LPLPLPQPQP AAPGSGPQER PRSRVLDFAN PPQQGHSGDS GGGPPPPLPP  420
PRASLGAMPA LPMLPGLTVM GRINTGAMGA PPPKQQQQQP QQQQQQQQQQ RLQFNPQGDA  480
GGRGALAAPQ TPLLDLPYPS GPSGYPPALH GIMLPPGLGA LLSNDLGAAQ GGPGGEGAPP  540
ASRQAAAAAM LPPPLPLDVP PLPGVEGRRG GAGRAGRQGQ AEGDDAAAGA CGTAGQYGVK  600
PEPWDEGGLP LGVVAGRALL PPRSGGPAAT GAGGTPSTLQ RPQRNRTANS LLYGAPGAGY  660
ERPSARRVSS ADAAEVAAAA QPALSDLPSA MHRTSSGGAP AASNRSRRSS DSNAKSCRCK  720
RSQCLKLYCD CFAAGQYCGA CSCASCHNRP EYADRVLTRR EEIAARDPQA FSRKIMDAPG  780
GIAKHKRGCN CKRSHCLKKY CECYQGGVKC GMQCKCLECE NMDVVETAPA GRARGGARAK  840
AGGRAGGAAA RRSSASGAAE AQLSPPEGSG DEEEEDDEPP ARRPMTMRMS LPPMGLLSPP  900
SVSAPHGEGG GEPPLSADVS PASGGGDGGW DGGPGTLPLP LPLSLPLPLP FPSAAATAVS  960
KPAGGPRPLR AGITHFGGGF SGGGASPSDS VPEPQQQRQQ QQQARPPLPL PAPGRPQRKR  1020
TAPAWRGRSF ASDSDGSEAE EGGRGDEEDE GLEQGSRRGA KGGEQRRQQQ QQQQIQQQQQ  1080
QQQRQQQQEL EEQLQQQQRQ QQQNLQQQHH HHHQQQQQQQ QQQWQRTGGS DQRDQSEGDA  1140
SAADVAGPSA TRRLSVAEAE ALLSTPRPGT VEEADAAAAV ADAALAACPG FAPPPPSLPQ  1200
PPASRQAQPR ATLGPSSQHP GPIGGSLAPA VPSAAPPAML GGAGRAAVPT PDGGNEGGQN  1260
GGCGGTAMAA ATAAATEVVA ATRDGGDSGR RVDEYDTPAA AQHGQQREPP APPHGIGGGG  1320
GGLTSHRVSG GGSGLTPRRV SGGGGGDELM SPGALMGGVG LDFGGVDAAM ADEMIAAIAG  1380
AASMQHGGGG GGGDGGGAGA ARPGGGGLGG EGEALECRED LLGLGLGLGG LGMGMGLGMG  1440
MGLGVHDMED GDAADGADAF LFAPSQPNSV EGMRGVLGLG LGLGCTPPHP HGHNRHQQHG  1500
GGLFQPLSPI SMQLQRTGAA AAAATAAAAR RSRLLAERAA APPAQALLQQ QFSPSRRPSR  1560
FAPPGSGLSP YAPNLPQLGS FHRAGGSAPH HPHHPHHPHH AQFYDGGGGA RQAAPPDLGG  1620
VHTLVTPVRT SSGMGPHMAL LGGVGGVGGG VGGGVGGGGA RLSDTGKRKS YEAEAGGSQH  1680
PEHDGHRENW MLGPSSPAKL QRLHGGGHAP LQPLQLLGSG SHAAYANGPG SQQQHHQMQQ  1740
QQQHMQHQQH MQQQQHMQQH MQHMQHHHHM QQQQHAQQQM YPQQNHQQQQ NQHRAAPLLP  1800
PPEADGGGGR RAPPPAAARG GAPAAAAAGT GGRRVSAGAA KARNAAAEKE RLKASALLYM  1860
AQRVGGGGRP QPPGAGTAAA AGAPGGGGST LPAPDPGSFA GLQAPAQQQP QDQARQAEAA  1920
GRAGPLPAPL GPPANARSAA SGAPAQQQQQ QQADAALSTP GARGGGGGGG GCPGSGGSVT  1980
VVGGGMMTVA GQHVRLASMT KLASGSTLFR IGPKSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	3e-35	CPP family protein