PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH10453.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

WRKY

Protein Properties

Length: 831aa MW: 87812.1 Da PI: 6.7944

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH10453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.4	1.4e-28	299	356	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYG K vkgs++prsYY+C++agC +kk ver + d++v+ + Y+g+H h+ PNH10453.1 299 SDGWQWRKYGEKLVKGSPNPRSYYKCSHAGCLAKKIVERLDCDGTVLSTEYKGDHSHP 356 7********************************************************7 PP
2	WRKY	104.3	6.5e-33	551	609	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+vkgs+fpr+YY+Ct+ gCpv+k+versae+++++++tYeg+Hnh+ PNH10453.1 551 MEDGYRWRKYGQKQVKGSPFPRAYYKCTHVGCPVRKHVERSAEEESCFVVTYEGQHNHR 609 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 831 aa Download sequence
MGRFGRWTVT DEDKAEVLGY RLGISLTAAA FLFGGVFALL PADQEGARGA MQACLDPVVL 60 AGSAGLGVSL QLIHIYVSSL KRALQVLWAV GTAGVVYLVA TQDAPAAIFV YEHPAWIWAV 120 GPLFAALTGV AFKEGLCYGK AEAAGLFGAL PLLVEYVLLV SSMLLLGIFA GRKYTQAVKD 180 DIGDKSVFEG AGGGAHPYQN PLHPLAHLMN PRGATHDSPV LLPLLQQVEA SPTTGIHQLC 240 PPLFQSSGPT TRGLAALPLP VPQPMPARAE AASGAEPSRA AKREFEPRVG HGKQSVANSD 300 GWQWRKYGEK LVKGSPNPRS YYKCSHAGCL AKKIVERLDC DGTVLSTEYK GDHSHPAPST 360 AKPSRFKPKP KPEPPIAATQ VNPAADPLVL AQFPPLSISG PMPLGLMPAG GGGMLPIPEA 420 LKSDFPGPHH AASATAEQEE DTDTSEPEPA AVLKAAPQDT RAAQAAATAA KRLRDNPESP 480 SKRMDILAAY AEEAHRQLKT SSNSPEGAPG AKRQRTEAPS GRARANAEED DEGSGAPSGS 540 GMQRIVEITN MEDGYRWRKY GQKQVKGSPF PRAYYKCTHV GCPVRKHVER SAEEESCFVV 600 TYEGQHNHRP PTGSRRRSQK DVPEADEEAE AEEAEEDSSQ PTSPNYGGHA PQHSLAPQAQ 660 QVASKAQLLP QAQQQHQGNG ANVDFGQQLT HLLASTVLQQ AALSGVLPLL PYNNLTNETL 720 ASLGLSAEAL HGMETFNALN LTSVGNLADL TTLLRQHAQL DMALAAQAQA MDAAAAGWDP 780 LACLITPRPN VSPAGGPFGP VGQAQAVPSA GTGRQSKPTQ PARQQVATTE A

Sequence ? help Back to Top

Protein Sequence Length: 831 aa Download sequence

MGRFGRWTVT DEDKAEVLGY RLGISLTAAA FLFGGVFALL PADQEGARGA MQACLDPVVL  60
AGSAGLGVSL QLIHIYVSSL KRALQVLWAV GTAGVVYLVA TQDAPAAIFV YEHPAWIWAV  120
GPLFAALTGV AFKEGLCYGK AEAAGLFGAL PLLVEYVLLV SSMLLLGIFA GRKYTQAVKD  180
DIGDKSVFEG AGGGAHPYQN PLHPLAHLMN PRGATHDSPV LLPLLQQVEA SPTTGIHQLC  240
PPLFQSSGPT TRGLAALPLP VPQPMPARAE AASGAEPSRA AKREFEPRVG HGKQSVANSD  300
GWQWRKYGEK LVKGSPNPRS YYKCSHAGCL AKKIVERLDC DGTVLSTEYK GDHSHPAPST  360
AKPSRFKPKP KPEPPIAATQ VNPAADPLVL AQFPPLSISG PMPLGLMPAG GGGMLPIPEA  420
LKSDFPGPHH AASATAEQEE DTDTSEPEPA AVLKAAPQDT RAAQAAATAA KRLRDNPESP  480
SKRMDILAAY AEEAHRQLKT SSNSPEGAPG AKRQRTEAPS GRARANAEED DEGSGAPSGS  540
GMQRIVEITN MEDGYRWRKY GQKQVKGSPF PRAYYKCTHV GCPVRKHVER SAEEESCFVV  600
TYEGQHNHRP PTGSRRRSQK DVPEADEEAE AEEAEEDSSQ PTSPNYGGHA PQHSLAPQAQ  660
QVASKAQLLP QAQQQHQGNG ANVDFGQQLT HLLASTVLQQ AALSGVLPLL PYNNLTNETL  720
ASLGLSAEAL HGMETFNALN LTSVGNLADL TTLLRQHAQL DMALAAQAQA MDAAAAGWDP  780
LACLITPRPN VSPAGGPFGP VGQAQAVPSA GTGRQSKPTQ PARQQVATTE A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	2e-24	WRKY family protein