PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH07856.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

G2-like

Protein Properties

Length: 567aa MW: 59256.3 Da PI: 6.2005

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH07856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.2	1.6e-32	115	169	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k rlrWtpeLH+rFv v+qLGG++kAtPk il+lm+v+gLt++h+kSHLQkYRl PNH07856.1 115 KSRLRWTPELHTRFVTSVNQLGGPDKATPKGILKLMGVDGLTIYHIKSHLQKYRL 169 68****************************************************8 PP
2	Myb_DNA-binding	54.5	2.7e-17	117	168	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ ++v v+qlGg+ t+k I + mg g+t +++ks++qky+ PNH07856.1 117 RLRWTPELHTRFVTSVNQLGGPdkaTPKGILKLMGvDGLTIYHIKSHLQKYR 168 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MPQLIPSQSL PLGQFPLQPT QPAEYLQGLA FDAYGKAMPL GGLLPEHHRG STDGASTLLQ 60 PQQQTDFMMH PMGGVPHLMP GMGAYDLGLS AVGLGPGLMH GQFFAQPQRA ANPSKSRLRW 120 TPELHTRFVT SVNQLGGPDK ATPKGILKLM GVDGLTIYHI KSHLQKYRLN IRLPGEAMAG 180 DSADPSDSDG EGGGLGGPSA SVERTVETHS GVGTLGGGGG AYGGGGAEPT LSNNVAATVR 240 QVVHSRRAAG ASGSSGSTAS ATRRNLEEAL LFQMELQKKL HEQLEPIQEL RHHEMLRSGR 300 VGSLPASATP PEPARGQQPG DLLLSYHHPP QQQQQQQQGQ QPMSSGGQPA QPQLHHSFHQ 360 QQQQQQQQQQ LRQHQQHLQQ QQYMRQQHHH HQPSPQDLGQ AQGQGPGPGG LAALGALGAC 420 GAEAMGAAGP GSGTSPGGDG GGVGGLADLT FADFADFGDL DPAALEQQAM LAPGELLAMA 480 GLDAPGGGAG GSGAEGQPQP DLGEEGGGGG YEGGGGGHGL AGGDEAEEQY YDQQQQQQQY 540 KQEREQEARE ERPKRPRTER RSGGGSG

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MPQLIPSQSL PLGQFPLQPT QPAEYLQGLA FDAYGKAMPL GGLLPEHHRG STDGASTLLQ  60
PQQQTDFMMH PMGGVPHLMP GMGAYDLGLS AVGLGPGLMH GQFFAQPQRA ANPSKSRLRW  120
TPELHTRFVT SVNQLGGPDK ATPKGILKLM GVDGLTIYHI KSHLQKYRLN IRLPGEAMAG  180
DSADPSDSDG EGGGLGGPSA SVERTVETHS GVGTLGGGGG AYGGGGAEPT LSNNVAATVR  240
QVVHSRRAAG ASGSSGSTAS ATRRNLEEAL LFQMELQKKL HEQLEPIQEL RHHEMLRSGR  300
VGSLPASATP PEPARGQQPG DLLLSYHHPP QQQQQQQQGQ QPMSSGGQPA QPQLHHSFHQ  360
QQQQQQQQQQ LRQHQQHLQQ QQYMRQQHHH HQPSPQDLGQ AQGQGPGPGG LAALGALGAC  420
GAEAMGAAGP GSGTSPGGDG GGVGGLADLT FADFADFGDL DPAALEQQAM LAPGELLAMA  480
GLDAPGGGAG GSGAEGQPQP DLGEEGGGGG YEGGGGGHGL AGGDEAEEQY YDQQQQQQQY  540
KQEREQEARE ERPKRPRTER RSGGGSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	553	559	PKRPRTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	2e-25	G2-like family protein