PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH02522.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

Nin-like

Protein Properties

Length: 577aa MW: 59327.8 Da PI: 11.22

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH02522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	56	8e-18	442	490	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++ ++ +++ F+lpi +AA+ Lg +++ +Kr+CR++G++RWP+Rk+ sl PNH02522.1 442 QLPMDAIRRLFELPIDEAARALGASVSEVKRRCREHGVARWPQRKLVSL 490 677899***************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MSEPLPMPNG TRRPPGGFNP AHCTETPDTA GVTGHHQPLL RTGPPFHLRQ QQQEQQQRQQ 60 QQQQQQHQEL LQSAAVAAAT VGFSTQRLQL GQAPALETPP LPPTLASHTP WPWPQLLHRP 120 HHPSAPPLMP QARALTVGGA VLAGLAPLPV LHPEGVDHAM LEDQLLAEIA AAPWPAYRPP 180 GQGRSATVTA PVLLGGGGHG LMLPPPPPPP ASAPLLPWAG ASAARSRNSP ATSASLASSS 240 APSAGAGWWS GAVSAVPVDA GALGLLLLPG QMQCPLQGPP SEVILAAPAA QRQAAIAVAA 300 AAAAAPHFDA VANVEAASDY SSDATSSGTQ PSPNRRRRAR DEQRGKRQRR GRRPPLPPQL 360 QPTAAASAPA ALIAGGSPVD STATSPGGEL RGARQLYGGG GGGGGGSGGG GGGGGGGGRP 420 CGSTASFGGI SEGGRGAGSA GQLPMDAIRR LFELPIDEAA RALGASVSEV KRRCREHGVA 480 RWPQRKLVSL RRVAEAARAD QAMPEEERQA LLSQVELNRS LILNDANAPL LPSLKTLRQH 540 QYRRGFQMRS RGSMGSLIGD PGRVGQDPGT ESASGRL

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MSEPLPMPNG TRRPPGGFNP AHCTETPDTA GVTGHHQPLL RTGPPFHLRQ QQQEQQQRQQ  60
QQQQQQHQEL LQSAAVAAAT VGFSTQRLQL GQAPALETPP LPPTLASHTP WPWPQLLHRP  120
HHPSAPPLMP QARALTVGGA VLAGLAPLPV LHPEGVDHAM LEDQLLAEIA AAPWPAYRPP  180
GQGRSATVTA PVLLGGGGHG LMLPPPPPPP ASAPLLPWAG ASAARSRNSP ATSASLASSS  240
APSAGAGWWS GAVSAVPVDA GALGLLLLPG QMQCPLQGPP SEVILAAPAA QRQAAIAVAA  300
AAAAAPHFDA VANVEAASDY SSDATSSGTQ PSPNRRRRAR DEQRGKRQRR GRRPPLPPQL  360
QPTAAASAPA ALIAGGSPVD STATSPGGEL RGARQLYGGG GGGGGGSGGG GGGGGGGGRP  420
CGSTASFGGI SEGGRGAGSA GQLPMDAIRR LFELPIDEAA RALGASVSEV KRRCREHGVA  480
RWPQRKLVSL RRVAEAARAD QAMPEEERQA LLSQVELNRS LILNDANAPL LPSLKTLRQH  540
QYRRGFQMRS RGSMGSLIGD PGRVGQDPGT ESASGRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	9e-13	Nin-like family protein