PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH02410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | C2H2 | ||||||||
Protein Properties | Length: 362aa MW: 40265.4 Da PI: 8.1949 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.1 | 0.00014 | 8 | 32 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg +F + +L++H rtH PNH02410.1 8 YACDheGCGATFALSGDLTTHKRTH 32 789999******************9 PP | |||||||
2 | zf-C2H2 | 16 | 3.4e-05 | 38 | 62 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C+ sF+++ +Lk+H rtH PNH02410.1 38 YACDhpGCKASFTQSGHLKNHKRTH 62 789999******************9 PP | |||||||
3 | zf-C2H2 | 16.9 | 1.8e-05 | 68 | 92 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cg +F + nL++H rtH PNH02410.1 68 YTCDheGCGATFALSGNLTNHKRTH 92 99**********************9 PP | |||||||
4 | zf-C2H2 | 11.5 | 0.00091 | 98 | 122 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg +F + L++H r H PNH02410.1 98 YACDheGCGATFAMRGALTTHERAH 122 789999*****************98 PP | |||||||
5 | zf-C2H2 | 17.9 | 8.3e-06 | 128 | 152 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F +snLk+H rtH PNH02410.1 128 YACDyeGCGAAFAMRSNLKNHKRTH 152 789999******************9 PP | |||||||
6 | zf-C2H2 | 15.3 | 5.6e-05 | 158 | 183 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C Cg F+++ +L+ H r+ H PNH02410.1 158 YACDneGCGAAFTQSNHLTIHKRSwH 183 789999*****************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MHTGEKPYAC DHEGCGATFA LSGDLTTHKR THTGDKPYAC DHPGCKASFT QSGHLKNHKR 60 THTGEKPYTC DHEGCGATFA LSGNLTNHKR THTGEKPYAC DHEGCGATFA MRGALTTHER 120 AHTGEKPYAC DYEGCGAAFA MRSNLKNHKR THTGEKPYAC DNEGCGAAFT QSNHLTIHKR 180 SWHTQEGQAR QKKQEQRVSR ALDKAGIPYK REHQIDFRCV GDDAGFMARV DFVILLHGRV 240 IFLEVDEGQH KFGSYGSASC DMKRMSRILE SLAQGGNTLP LVFLRYNPNV FRVDGKVVKK 300 LKVTRESELV SLLENPASDV FLCDRPLVIQ YMYYDVAGCH AVVTRDPEYN VHIAQCCARS 360 IV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 7e-25 | C2H2 family protein |